| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1310 |
|---|
| Symbol | |
|---|
| ID | 5057763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1473689 |
|---|
| End bp | 1474558 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473582 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_001158158 |
|---|
| Protein GI | 145593861 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGACGC GCGACGAGGA CGGCGCGGTC GACCCGCGGC GTCGCCGGGC CCGGCGACGC
CGCCGCCCGA TGCCGCTCTG GCAGGAGTTG CCGCTGCTGC TGACGGTCGC GTTCTGCCTC
GCGGTGCTGA TCCGTACCTT CCTGCTTCAG GCGTTCTTCA TTCCCTCCAG CTCGATGACG
GAGACGCTCC TCGTCGGGGA CCGGGTGCTG GTCAACAAGG TCGTCTACGA CGTACGGGAC
CCGGTGCGGG GAGAGGTGGT GGTCTTCCGC GGCACCGAGC GGTGGGCCGC CCCACTCGAC
GAGGAGTCCG AGACCGGGTT CCTACGCCGG CTCACCGCCA CCTTCGGCGA CCTGGTGGGG
GTCGGCGGCC CCGGCGAGAA GGACTTCATC AAGCGGGTCA TCGGGCTACC GGGTGACCGG
GTGAGCTGCT GCGACGAGCA GGGGCGGGTG CTCGTCAACG GCATGGGCAT CAACGAGCCG
TACGTGTGGC GCGACTCGCC GCTGGACCTC CCGCCGAATC CGGGTGAGTG CCGCGCGCGT
CGCTTCGACG AGGTGATCGT CCCGCCTGGG CAGCTCTTCG TGCTGGGCGA CAACCGGCTG
GTCTCCCAGG ACGCCCGCTG TCAGGGCCCG GTGCCGATCG ACAATGTGGT CGGACGGGCG
TTCGGCGTGG TATGGCCATC GTCGCGGTGG GGCGCACTCT CCACACCGGA GACCTTCGCG
AACGTTCCGG CCTCGGTGGG TTTCCCGACC AGCGGGCCAC CGCCGGTCGC GCCGAGCCCC
GAGGGTGGCG TGCTGCTGCT CCTTCCGCTT CCGGCCGCGT GGCTCAGTTC TCGCGCGTTC
CGTCCGGTGC CGCCCAGCTC GGCAACGTAG
|
|---|
| Protein sequence | MQTRDEDGAV DPRRRRARRR RRPMPLWQEL PLLLTVAFCL AVLIRTFLLQ AFFIPSSSMT
ETLLVGDRVL VNKVVYDVRD PVRGEVVVFR GTERWAAPLD EESETGFLRR LTATFGDLVG
VGGPGEKDFI KRVIGLPGDR VSCCDEQGRV LVNGMGINEP YVWRDSPLDL PPNPGECRAR
RFDEVIVPPG QLFVLGDNRL VSQDARCQGP VPIDNVVGRA FGVVWPSSRW GALSTPETFA
NVPASVGFPT SGPPPVAPSP EGGVLLLLPL PAAWLSSRAF RPVPPSSAT
|
|---|
| |