Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1264 |
Symbol | |
ID | 5057717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1426558 |
End bp | 1427238 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640473536 |
Product | hypothetical protein |
Protein accession | YP_001158112 |
Protein GI | 145593815 |
COG category | [S] Function unknown |
COG ID | [COG1920] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.873584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGTAC CGGCACCGGG CTGGCAGGAT GGCGGGGTGA CCCAGGTGTG GACCGTAGTG GTGCCGGTGA AGCGGCTGGA CGCGGCGAAG AGCCGGCTCC GCGGCGCGCT GCCGGGCCGG CCCCACGAGG CGTTGGCGCT GGCGTTGGCG GTCGACACCG TCGAGGCGGT ACGGGCCTGT TCGGTGGTCG CCGAGGTGCT GGTGGTTACG GACGATCAGG CCGTGGCGGC GGCGACCGGG GCGGCCGGCG CCCGGGTGGT GCCGGACCGC CCCGCCGCCG GTCTCAACCC CGCTTTCCGG TACGGCGCGG CGGTCGCCGG AGACGGCTGG GTCGCGGGCC TCACGGCGGA CCTGCCCGCG CTACGCCCAG TCGAGCTGGC GGCCGCCCTG TCGGCGGCGC GGTCCGGTCC CACCAACCGC CGGTACGTGC CCGACGCCCC CGGCACCGGC ACCGTGCTGC TGGCCGCACC ACCCGGTATG CCCCTGGATC CACGCTTCGG TGGCAACTCG GCGGCCGCCC ACGCGGCCAG CGGTGCGCTC CCCCTGCTCG GTGACTGGCC GAGCCTGCGT CGAGATGTCG ACACCGCCGC CGACCTGGCC GCGGCCACCC GGCTCGGGCT GGGCGCGCAC ACCGCGCCGC TGTGTGGCAC GACCACCCCA ACAGCCAGTC GGCCGGTGTA G
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Protein sequence | MRVPAPGWQD GGVTQVWTVV VPVKRLDAAK SRLRGALPGR PHEALALALA VDTVEAVRAC SVVAEVLVVT DDQAVAAATG AAGARVVPDR PAAGLNPAFR YGAAVAGDGW VAGLTADLPA LRPVELAAAL SAARSGPTNR RYVPDAPGTG TVLLAAPPGM PLDPRFGGNS AAAHAASGAL PLLGDWPSLR RDVDTAADLA AATRLGLGAH TAPLCGTTTP TASRPV
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