Gene Strop_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1194 
Symbol 
ID5057644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1346184 
End bp1347011 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID640473463 
Producthypothetical protein 
Protein accessionYP_001158042 
Protein GI145593745 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACCC ACAAGGCGTG GCAGGGGCGC CTGGTGGCCC ACCCGCTACC GGCAGCCGAA 
CGCCTGCGGC ACTACACCGG GTGGTGCACG GCAGTGGAGG GGAACACCAC CTTCTACGCA
ACCCCCTCCC GGGAGACGGT GTCCTCCTGG GCCCAGCAGA CCGACCCGGA CTTCGGGTTC
GTGCTCAAGC TGCCCCGGGT CGTCACGCAC GAGCGCCGCC TCCATGATGT CGACGAACCG
CTGCGCGCCT TCCTGGACGT GATCGAGCCC CTGGGCCCTC GGGCGCAGGC TCTCTGGATC
CAGGTGCCGG GTTCTTTCGC TCCCACCGAC GTGGCCACCC TCGCCCGTTT CCTGCGCCGC
CTTCCCCCGA CCCACCGGTA CGCGGTCGAG GTGCGCCACC CCGCGTTCTT CCTCGACCCA
CGAGCGGCCC AGTTGCTGGT CCGGACGCTG GCCGCCACCG GCACCGAGTG GATCCCCTTC
GACACCACCA CGTTCTTCGC CCGCCCACCG ACCAGTGACG CGGAACGGGA TGCCTGGACG
AAGAAGCCAC GGATGCCGCT CCGGTCGGAG GCGCTGACCG ACCGGCCGAT CGTCCGCTAC
CTCGGCCGGG ACGATCCCGA CCAGAGCAGT GCGGGCTGGC AGCGGTGGGT CGACAGGGTC
GCCGGCTGGC TCCAGGAGGG CCGTTCGCCC GTTTTCTTCG TCCACACTCC AGACAACGCC
GACGCCCCGG TGCTCGCCCG CCGCTTCCAC GACGAGGTGC GGGCCCGCGT CCCCGCGCTC
GAGCCGCTGC CCCAGCCGGC TCCGGTGCAA CCGCTGACCC TCTTCTGA
 
Protein sequence
MWTHKAWQGR LVAHPLPAAE RLRHYTGWCT AVEGNTTFYA TPSRETVSSW AQQTDPDFGF 
VLKLPRVVTH ERRLHDVDEP LRAFLDVIEP LGPRAQALWI QVPGSFAPTD VATLARFLRR
LPPTHRYAVE VRHPAFFLDP RAAQLLVRTL AATGTEWIPF DTTTFFARPP TSDAERDAWT
KKPRMPLRSE ALTDRPIVRY LGRDDPDQSS AGWQRWVDRV AGWLQEGRSP VFFVHTPDNA
DAPVLARRFH DEVRARVPAL EPLPQPAPVQ PLTLF