| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1193 |
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| Symbol | |
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| ID | 5057643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1344245 |
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| End bp | 1345978 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640473462 |
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| Product | cell wall anchor domain-containing protein |
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| Protein accession | YP_001158041 |
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| Protein GI | 145593744 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
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| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.770644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGAA TCGGTCAACG GCTCGGCCGA GGCGTTGGAG GGCGGCAGGC GGGACGCACC
GCCGCCGGAT GGTTCTCCCT CGCGCTGGCC GTGACGGTCG CGCAGGCGGT CGTCGTGTCG
CCCGCGTTCG CGCAGAACAA GCCACCAACG ACCGCCGCCG TGACGGACAC CGCCCTCACC
TGGGGTCAGA ACGACAGGGG CCAGTTGGGC AACGGGACCA CCACCAACAG CACCGATCCC
GTCGAGGTCA GCCTGCCTGC GGGCACCCTG CTCACCGACA TCGCCGGCGG CGGCAAGCAC
AGCCTGGCCC TGACCTCCAC CGGCAGCCTG CTCGCCTGGG GCAACAACGC CAACGGTCAA
CTCGGCGACG GGACCACCAC CAGCAGCAAC ACTCCCGTCG CGGTAGACCT ACCCGCGGGA
ACCGAGGTGG TCGCCATCGC CGCCGGCAAC GACCACAGCC TGGCGTTGAC CTCCACCGGT
GCCGTCCTCG CCTGGGGCGA CAACTCCTCC GGGCAACTCG GCGACGGGAC CAACGACGAC
CGCAGCACAC CCGTCACCGT CGACCTGCCC ACGACCAGCA CGACCACCGC CATCGCCGCC
GGCTCCGTCC ACAGCCTGTC CCTGACCTCC ACCGGCAGCG CCTTCGCCTG GGGAAACAAC
GACGAGGGCC AACTGGGCGA CGAGTCCACC ACCAGCACCA ACAAACCCGT CAACGTCGCC
CTGACAACGG GCACGACGCT CACCGCCATC GCTGGCGGAT CGGCCCACAG CCTCGGGATT
ACTTCTGACA ACACCGCCGT CGCCTGGGGA AGCAACTCCC AGGGTCAGCT CGGTGACGGC
ACCAACACCA ACGCCCTCGC ACCCGTCAAC GTCGCCCTGA CAACGGGCAC CACGGTCACT
GCCATCGCCG CCGGCCTCCT CCACAGTGTC GCGCTGCTGA CCAACGGCAC CGCCGCCACC
TGGGGCAACA ACGCCACGGG CCAGCTGGGC AACGGGAACA ACGTCACCAG CAACACACCC
GTCGAGGTCA GCCTCCCCAG CGGCACCACG CTCACCGCCA TCGCCGCCAA CAGCAGCAAC
CACACCGTGG CGATCACCAA CACCGAAACC GCTCTCGCCT GGGGCGACAA CTCCTTCGGT
CAGCTCGGCA CCGAGGTCAC CACCAGCGGC GACGTCAGCA TCGCCAGCAG CAGCAACACG
CCCGTCGCGG TCAACCTGTC CACCGGCACC ACCCTGACCA ACACCGCCGT CGGCACCAAC
CACAGCCTGG CCCTGCCCAC TCTGATAGCG AGCTCCACCA CCACCCTGGA TGTCTCGCCG
CAGGACCCGA CCGCGGATCA GGACGTCACG CTCACCGCCA CCGTCACCTG TAACACCGGC
GATCCCAGTG GGAGTGTCAC CTTCCGCAAC AACAACACCG ACCTCGCCAC CGTGCCCCTG
GACACCACCA ACACCGCCAC CTACACCACG ACGCTCCCCG TCGGCACCAA CAATCTCACC
GCCGACTTCA CCAGCGTCGA CACCATCTGC CCCAACAGTC AGTCCGAAGC CGTCACCATC
ACCGTCACCG ACCCGTCCGA CCCCACTGAC CCGACGGATC CGACCGATCC CGACCTACCC
ATCACCGGGG CCAGCCTGCC CAGCCTGCTC GGCACCGCCA CCCTGCTCAT CCTCATCGGC
GCCAGCTTCA TCGTCCTCAC CCGCCGAAGC CGGTCCACCC ACCACCAGAA GTAG
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| Protein sequence | MQGIGQRLGR GVGGRQAGRT AAGWFSLALA VTVAQAVVVS PAFAQNKPPT TAAVTDTALT
WGQNDRGQLG NGTTTNSTDP VEVSLPAGTL LTDIAGGGKH SLALTSTGSL LAWGNNANGQ
LGDGTTTSSN TPVAVDLPAG TEVVAIAAGN DHSLALTSTG AVLAWGDNSS GQLGDGTNDD
RSTPVTVDLP TTSTTTAIAA GSVHSLSLTS TGSAFAWGNN DEGQLGDEST TSTNKPVNVA
LTTGTTLTAI AGGSAHSLGI TSDNTAVAWG SNSQGQLGDG TNTNALAPVN VALTTGTTVT
AIAAGLLHSV ALLTNGTAAT WGNNATGQLG NGNNVTSNTP VEVSLPSGTT LTAIAANSSN
HTVAITNTET ALAWGDNSFG QLGTEVTTSG DVSIASSSNT PVAVNLSTGT TLTNTAVGTN
HSLALPTLIA SSTTTLDVSP QDPTADQDVT LTATVTCNTG DPSGSVTFRN NNTDLATVPL
DTTNTATYTT TLPVGTNNLT ADFTSVDTIC PNSQSEAVTI TVTDPSDPTD PTDPTDPDLP
ITGASLPSLL GTATLLILIG ASFIVLTRRS RSTHHQK
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