| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1183 |
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| Symbol | |
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| ID | 5057633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1327914 |
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| End bp | 1329764 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473452 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001158031 |
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| Protein GI | 145593734 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCTGCC GCGGGTGTGC GGCGCCGCCG ATCGGGTACG GGGCGCGGGG AGGTGCTGCC
GTGGCCCAGA AGAACGAACG GAAGAGCCGA TCCGAGGCGC CCCACCAGCA CTCCCCGAAC
GTGCTCCGGG AGTACGCACT ACTCGCCGAC GGGCAGCGGG CGGCGCTGGT CGGCCCGGAC
GGGAACATCG TCTGGCTCTG CGCCCCCGGG TGGGCCGACC CGCCGCTGTT CAGCAGCCTC
CTCGGCGGCC GGGGCAGCTA CCTGGTGACC CCGACGAACC AGCGCTTTGT CTGGGGCGGG
CAGTACGAGC CCCAGTCGCT GATCTGGATC AACAGGTGGA CGACCGCCGA CGGAATCATC
GAGACCCGGG AGGCCCTGGC GTTCCCCGGC GACGCCCAAC GGGTGGTCCT GCTACGCCAG
GTACGCGCGG TGGACCAGGA CGCGAAGGTC CGGATCCGGC TCGACCCCCG GGCGAACTTC
GGTCGAGAGC CGCTGCGCCA GGTACGACAG GACGGCGGTC TGTGGCACGC TCGCTGCGGC
AACCTGCACC TCCGCCACAG CTGCGGCCAC CCCCTCGAAC CCAGCGCCGA GGGGTCGTGC
GACGGCGAGT TGCGGGTGCC GGCCGGCGGG CAGGCTGACC TGGTGCTGGA GATCTCCACC
CAGCCGCTCG AGGACGAGCC ACCCGACCCC GCCGAGCTGT GGCGGATCAC CGAGCAGTCC
TGGCGGAAGG TGCTGGAGCC GCTGACCCGT GGCACCGCGG GACGAGACGC CGTCTTCGCC
TACACGGTGC TGCGCGGGCT GACCCGGCCC GGCGGTGGGA TGGTCGCCGC GGTGACCACC
GGCCTGCCGG AGCGAGCGCT CGCCGGCCGC AACTACGACT ACCGGTACGC CTGGATCCGC
GACCAGTCGT TCGCCGGGCA GGCCGCCGCT CTGATCGGTC GGCACGACCT CCTCGACGAC
GCGGTGCGGT TCCTCACCGA CCGGGTCCTC GCCGACGGCG ATCGGCTCGC TCCCGCCTAC
ACCGTGGACG GCACCCCCGT ACCGCCGGAA GAGGAGCTGA CGTTTCTGCC CGGCTATCCG
GGGGCCAAGG CCCGGACCGG TAACTGGGTT CGGGGGCAGT TTCAGCTGGA CGCCTACGGC
GACGTGCTGA TGGTCCTGGC AACCGCCGCC GACCGGGGAC GGCTGGAGGC CACCTCCTGG
CAGGCGCTGA CCGTCGCCGC CGAGGCCATC GAGAAGTGCT GGCGGTCACC CGACTCGGGC
ATCTGGGAAC TCCCGGCCCG GCAGTGGACC CACTCGAAGC TGAGCTGTGT GGCCGGGCTG
CGCGCGGCGG CCCGGGTCGC GCCGGGCGGA CTTGCCGGCC GTTGGGCCTC CCTCGCCGAC
ACGATTCTCG CCGACACCAC CGCGCACGGC CTACACCCCT CCGGGCGTTG GCAACGCGCC
TACGACGACC CCCGAGTCGA CTCGGCGTTG CTGTTGCCGG CAATCCGAGG CGCGCTTCCC
GAGGGGGATC CTCGGACCGA GGCGACCCGT CGGGCCGTCC TGAACGAGCT CCAGCAGGAC
GGCTACCTGT ACCGGTTTCG ACCGGATCGC CGCCCGCTCG GGGACGCCGA AGGGGCCTTC
CTGCTCTGTG GTTTCGCCGC GGCGCTCGCC GAGTGGCAGG CCGGCGACAT CGTCGCCGCG
AACCGGTGGT TCGAACGTAA CCGGGCGGGG TGTGGTCCAC CGGGGCTCTT CACCGAGGAG
TTCGACGTGG CGCAGCGGCA GCTGCGGGGC AACCTGCCGC AGGCCTTCGT GCACGCGCTG
ATGCTCGAAA CCGCCGTGCG CCTCGGCCAC GCCGCTCCCT GTGCCGACTA G
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| Protein sequence | MGCRGCAAPP IGYGARGGAA VAQKNERKSR SEAPHQHSPN VLREYALLAD GQRAALVGPD
GNIVWLCAPG WADPPLFSSL LGGRGSYLVT PTNQRFVWGG QYEPQSLIWI NRWTTADGII
ETREALAFPG DAQRVVLLRQ VRAVDQDAKV RIRLDPRANF GREPLRQVRQ DGGLWHARCG
NLHLRHSCGH PLEPSAEGSC DGELRVPAGG QADLVLEIST QPLEDEPPDP AELWRITEQS
WRKVLEPLTR GTAGRDAVFA YTVLRGLTRP GGGMVAAVTT GLPERALAGR NYDYRYAWIR
DQSFAGQAAA LIGRHDLLDD AVRFLTDRVL ADGDRLAPAY TVDGTPVPPE EELTFLPGYP
GAKARTGNWV RGQFQLDAYG DVLMVLATAA DRGRLEATSW QALTVAAEAI EKCWRSPDSG
IWELPARQWT HSKLSCVAGL RAAARVAPGG LAGRWASLAD TILADTTAHG LHPSGRWQRA
YDDPRVDSAL LLPAIRGALP EGDPRTEATR RAVLNELQQD GYLYRFRPDR RPLGDAEGAF
LLCGFAAALA EWQAGDIVAA NRWFERNRAG CGPPGLFTEE FDVAQRQLRG NLPQAFVHAL
MLETAVRLGH AAPCAD
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