Gene Strop_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1178 
Symbol 
ID5057628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1321608 
End bp1321793 
Gene Length186 bp 
Protein Length61 aa 
Translation table11 
GC content68% 
IMG OID640473447 
Producthypothetical protein 
Protein accessionYP_001158026 
Protein GI145593729 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.920193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTTCG GATTCGACCA GCTCGGCTTG CGTGAAGTCA GCGCGGGGTG CGACCCCGCC 
AACGTGGCCT CTGCTCGCGT CCTGACCAAA ATCGGGATGC GGCCTGCCGG GTACCGGCAC
AACCACCTCC AGATCCGCGG GCAGTGGCGC GACCGGCTGT TGTTCGCCGC CACCTCGACC
GGTTAG
 
Protein sequence
MGFGFDQLGL REVSAGCDPA NVASARVLTK IGMRPAGYRH NHLQIRGQWR DRLLFAATST 
G