| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1175 |
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| Symbol | |
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| ID | 5057625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1317578 |
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| End bp | 1318987 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473444 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001158023 |
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| Protein GI | 145593726 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.62148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.49542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGGCT GGCGCGGCAC GAGCCGGCGG GGCGGCGGCA AGATGGACGG TGTGATGGCT
GATCAGCGAC CGTCGGCCCG GTACGGCTAC CGGAGTCTCG GGGCTGAACC CGGCTTCCGG
GTCCGGTTGG CGGGCGCCGC GGCCAGCAAG CTTCAGGCCG GCATGTTCTC CTTCGCGTTG
CTCTACGCGG TCTCCGCCGG TCGCTCCTAT GGCGTCGCCG CACTCGTTGT CGCGGTTGCC
GCCCTCGGTG GCATCGCGGC GCCCTTCCGG GGGCGACTGC TCGACCGATT CGGCGACAGA
CGTGTCCTGT GGCCCATCTT GACCGTGCAT GTGGGCTCAG TGACGGCGCT GTCGGTCAAC
GAAGGACTCA ACGGGCCGGT ACTGGCGACC TTCGGGTCGG CGCTCGTGGC GAATGTGTCG
ATGCCTCCGG TCGGGGTGCT GTCCCGGGTC ATGTGGCGCA GGATGTCGCA GCCGCAGAAT
GTCCGGAGCG CGCTGGCGCT CGACGCGGTG CTTACGGATC TCGCCTTCGT CTTCGGACCC
GCCCTGGTCG GTCTGCTGAC CGAAACGGTG TCGCCGATAG CCGGGTTGGT GGTTTCCAGC
GGCTCCAGCG CGCTGGCGAC CGTCCTTCTC CTTCGGGCCC AGGCCGGCCG GGGGCCGGTA
CGGGACCCCA GCCGGGGGCC GGAGCGGGGC GCCGGCGGCG CGCGGCACTG GGCCGGTCCG
CTTGTGCTGG CGCCCCTACG CTGGCTGCTG CTCGTCGCCT GTCTCTTCTC CGCAGCGTTG
CATGCCGTGC AAATTGCGCT CCCCGCAGCG GCTGGCCGGT CGGCTGGTGC TGCTCTGGTC
AGCGTCCTGT CGGTGGGCAG CATCGTCGGT GGCCTGGTGG TTGGGGCGCT GCGCGGGCGG
TGGGTACCTC GGCTGCCCGT CCTGCTTCTG GGTCTTGCTC TCGCGTGTGT GGCCCTGGCG
GTGGTCGGTC GGTTGCCGCT GGGGCTGTTG GTGGCCGGCT GCCTCCTGGT CGGTCTCTTC
ATCGGGCCCA CCTTTGTTGC CCTGTACGGC GATGCGGGTG ACCTGGCGCC TTCGGGCACC
GAGGCGGAGA CGCAGTCATG GACGGGGGCT GCCATTCAGC TCGGCGCAGC CGTTGGTGCT
GCGGCCGGCG CTGCCGCCAT CGAGGGCTGG GCGCCGCTGG CCGCGGTCGG GGTGGCTGCC
GTGCTGGCGC TGTCGGGATT TGGGGCGGGC CTGCGGGTGG TCCGCGCGCA GCGGCACCGT
AGCCGGAGCC GACTGGACGG CTCACGCAAG AACCCACCTC CAGCTGAGCG GGATGAGGCC
GGCCGCCTTT CTGCGGTGAC CAACAACCTT GACGTACCGC CGGCCGTTGA TCCTGGCGGT
AGAGGTGTTT CTGCTCGCAT CAAGGGATAG
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| Protein sequence | MVGWRGTSRR GGGKMDGVMA DQRPSARYGY RSLGAEPGFR VRLAGAAASK LQAGMFSFAL
LYAVSAGRSY GVAALVVAVA ALGGIAAPFR GRLLDRFGDR RVLWPILTVH VGSVTALSVN
EGLNGPVLAT FGSALVANVS MPPVGVLSRV MWRRMSQPQN VRSALALDAV LTDLAFVFGP
ALVGLLTETV SPIAGLVVSS GSSALATVLL LRAQAGRGPV RDPSRGPERG AGGARHWAGP
LVLAPLRWLL LVACLFSAAL HAVQIALPAA AGRSAGAALV SVLSVGSIVG GLVVGALRGR
WVPRLPVLLL GLALACVALA VVGRLPLGLL VAGCLLVGLF IGPTFVALYG DAGDLAPSGT
EAETQSWTGA AIQLGAAVGA AAGAAAIEGW APLAAVGVAA VLALSGFGAG LRVVRAQRHR
SRSRLDGSRK NPPPAERDEA GRLSAVTNNL DVPPAVDPGG RGVSARIKG
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