| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1173 |
|---|
| Symbol | |
|---|
| ID | 5057623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1314323 |
|---|
| End bp | 1314931 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640473442 |
|---|
| Product | regulatory protein, TetR |
|---|
| Protein accession | YP_001158021 |
|---|
| Protein GI | 145593724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.959952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGAG TCTCCGAAGA CCACCGTGCC GCCCGCCGCC GGCAGATCCT GTCGGCCGCC
GCGACCCGCT TCGCCCGCGA CGGCTTTCAC CGCACCTCCA TGCAGGACGT GGTGGATGAG
TCCGGCCTGT CCTTTGGCGC CGTCTACCGC TACTTCCGCA CCAAGAACGA CATCGTCATG
GCGATCTCCC TGGAGGCGAT CAGCGTGATC GAGACGGTGG TCCGTGACGG TGTTCAGGCC
GGTCGCCCCG TCGCCGACCT GCTGGCTACG CTCCCGCGGG CGCTGCTCGC CCTCGAACAG
ATCGACGAGC GGATGCGGCT GGCGGTGCAG GCGTGGGGGG AGGCGCTCCG CGATCCAGCC
CTCGCCGAAC GGATGCAGGA AGGCCTGCGG CGTGCCCGCG CCGCGCTTCG GGAGAGCATC
GAGGTCAGCT GTGTCGACAG CGGCGTCCGC ATCGACGCGG ATGCCGCGGC ACAGGTCCTG
ATCTCAATCA TTCAAGGCTT CATCCTGCAA CGCTCCTGGG ACCCCCGCCT CGACGCTGAC
TCGTACGGTC AGGCTGCCCA AGCGCTGATC AGCGGAACGC TGGGCGGCGC TGCGGCGGGG
CAGCGTTGA
|
|---|
| Protein sequence | MPRVSEDHRA ARRRQILSAA ATRFARDGFH RTSMQDVVDE SGLSFGAVYR YFRTKNDIVM
AISLEAISVI ETVVRDGVQA GRPVADLLAT LPRALLALEQ IDERMRLAVQ AWGEALRDPA
LAERMQEGLR RARAALRESI EVSCVDSGVR IDADAAAQVL ISIIQGFILQ RSWDPRLDAD
SYGQAAQALI SGTLGGAAAG QR
|
|---|
| |