Gene Strop_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1143 
Symbol 
ID5057593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1288129 
End bp1289037 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID640473413 
Producthypothetical protein 
Protein accessionYP_001157992 
Protein GI145593695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATC CGGTTCTGCG GGTGCAGTCG CAGTTGACCG ATCGTGACCG GGTCCTGCTG 
GGCTGGCTCT ACGACCACGG CGTGCTGACG TCGTCCCAGA TCGCCCAGGC ACTGTTCCCA
TCCCTTGATT TCTGCCAGCG CCGATTACGG ACTCTGTATC GGCTGCGCCT CGTCGCTCGG
TTCCGACCGC AACGGGCCGA CGGCGGCTCC TACCCGTACC ACTACGTCAT CGACCAACTC
GGCGCTGAGG TCGTTGCCGC CAGCCGCGAC GAACGCCCGC CCCGGCGCGA CCACGCCTGG
GTGGAACGGC GACGCTGGAC CTCCACCCGC AGCCTCTCTC ACCGCCTCGG GGTGAACGGC
TTCCTTACTG ACCTGGTCGG GCACGCCCGT ACTCATCCGG ACACCGGCTT GATGGAGTGG
TTGCCGGAGG TGGCGTGCCA GCGTGCCGGG ACGTTCACCA GCCGGCAGGA TCCGGGGCTG
GTGCGGGCGT ATCAGCCGAG GGTTCGCCCG GACGGCTACG GCCGGTGGGC CGATGGCGGT
GTCGAGGTGC CGTTCTTCGT CGAGCACGAC ACCGGCGCCG AGCAGTTGTC GATCTTAGCT
GGCAAGGTGG ACGGCTATCG GGAGCTTTTC GGCACGATCG GGCGGGCGTG GCCGGTGCTG
TTCTGGCTGC ACTCTGCTGC CCGGGAGCGC AGCCTACGCC GCGTGCTGGC CGAGGTGCCG
CTGGCGGTGC CGGTCGCCAC CGGGGCCCGC GACCACGCCG CGATGACGGG CCTCGGCCAA
CGCCCTCGCG ACCCTCATCA ACGCCGCGCC CGAGCAACTC GCCCGCCTCG GCGTCGACCC
CCAGCGGTCG ATAGCGTCAA TCGACGCGGC GAAGTTCGAC AACCGTCCCA CCTGGGACAA
CAAGGGTAA
 
Protein sequence
MDDPVLRVQS QLTDRDRVLL GWLYDHGVLT SSQIAQALFP SLDFCQRRLR TLYRLRLVAR 
FRPQRADGGS YPYHYVIDQL GAEVVAASRD ERPPRRDHAW VERRRWTSTR SLSHRLGVNG
FLTDLVGHAR THPDTGLMEW LPEVACQRAG TFTSRQDPGL VRAYQPRVRP DGYGRWADGG
VEVPFFVEHD TGAEQLSILA GKVDGYRELF GTIGRAWPVL FWLHSAARER SLRRVLAEVP
LAVPVATGAR DHAAMTGLGQ RPRDPHQRRA RATRPPRRRP PAVDSVNRRG EVRQPSHLGQ
QG