Gene Strop_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1126 
Symbol 
ID5057574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp1270040 
End bp1270636 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID640473394 
Productoligoribonuclease 
Protein accessionYP_001157975 
Protein GI145593678 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.499716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.391456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGTGG CAGATCTACT CGTCTGGATC GACTGTGAAA TGACCGGCTT GGACCTCGGC 
GGCGACAAGC TGATCGAAGT CGCCGCGCTT GTTACCGACC CCGATCTCAA CGTGCTCGGT 
GAGGGTGTCG ATGTGGTGAT CCACGCCGAC GAGGCGGCGC TGGACAAGAT GCCCGAGATC 
GTGGCGACGA TGCATGCGAA GTCGGGCCTC ACCGAGGAGG TCCGCCGTTC CACAATCGGG 
CTCGCCGAGG CGGAGGAGAT GGTCCTCGAC TACATCACCA GTCACGTGAA GGATCCGCGT 
ACCGCTCCGC TCTGCGGCAA CTCGATCGCC ACCGACCGGG GTTTCATCGC CCGGGACATG 
CCCCGGCTGG ACAACCACCT GCACTACCGG ATGATCGACG TTTCCTCGAT CAAGGAGCTC 
TGCCGGCGCT GGTATCCCCG GGTGTATTTC AGCCAGCCGA GGAAGGGCCT GGCACACCGG 
GCGTTGGCCG ATGTGCGCGA GAGCATCCGG GAGCTCGAGT ACTACCGACG GACACTCTTC 
GTGCCGCTGC CGGGGCCGGA CGTGGAGAGC GCCAAGGCGG TCGCCGCAAA GCTGTAG
 
Protein sequence
MPVADLLVWI DCEMTGLDLG GDKLIEVAAL VTDPDLNVLG EGVDVVIHAD EAALDKMPEI 
VATMHAKSGL TEEVRRSTIG LAEAEEMVLD YITSHVKDPR TAPLCGNSIA TDRGFIARDM 
PRLDNHLHYR MIDVSSIKEL CRRWYPRVYF SQPRKGLAHR ALADVRESIR ELEYYRRTLF 
VPLPGPDVES AKAVAAKL