Gene Strop_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1125 
Symbol 
ID5057573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1268715 
End bp1269941 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content69% 
IMG OID640473393 
Producthypothetical protein 
Protein accessionYP_001157974 
Protein GI145593677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.51418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.62159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGAAG ACGACACCCG CGGGCGGACG GCGCGTCGGA TCGTCACCGT TTTGGCTATC 
GCCGCCGTGC TGCCCGCGCT CTACGTGAAG GGAAAGCACG ACTTCTTCGA CCTGAAGATC
TACATGGCGG CGATGGACTG GTGGGCCATG GGCAACCCGC TCTACGACTA CGTCCAGCCG
GACCGGGTGC AGGGCGAGCT GTACTTCACC TACCCGCCAT TCGGCGCGCT GCTGTTGTCG
CCGTTCGCGC TGCTCCGGCT GGGCGCCACC GTGACGATCT TCACTGTGCT GACCGTGCTG
GCGGTGGTGG TGACCACCCG CTGGCTGGTC GACCCGGTGA TCGCCCGGCA CAACCTGCCC
CGGATCTTCA CCCTCGCCGT GGCGGTGCTG CTCGTACTCG CCGTGGAGAG CACCCGGGAG
ACCATCACCT TCGGGCAGAT CAACATGCTG CTGGTGGTGC TGATCCTGGC GGACCTGCTG
TTCGCCGTAC CGCATAACGG GCGTTGGGCC GGGGTGGGGG TGGGGCTGGC GACGGCGCTC
AAGTTGTACC CAGGCATCTT CATCGTCTAC CTGCTGGCCT GCCGGAAGTG GCGGGCGGCA
GCGGTGGCGA GCGCGACGGC AGCGGGAGCC ACGCTGCTCG CCGCGGTTGT CCTGCCGCTC
GAATCGTGGC GCTACTGGAC GCACGAACTG TGGGCCACCG ACCGGGTCGG CCGCACCGAC
TACACCGGCA ACCAGTCACT GCTCGGTCTG ATCCACCGCC TCACCGTGCC TCAGGAGCCA
GATCGACTCC TGTGGCTCGC CCTGGTCGTG GTGGTCGCCG GGTACGGGCT GTGGCGGGCG
GCCCGGGCGG CCCGTGCCGG CGACGCGCTG ACCGGCCTCA CCCTCACCGG CCTGGTTGGC
TCGCTGATCA GCCCGATCAC CTGGCCCCAT CACATCTACT GGTTCGTGCC GGCCGTCGTG
GTGCTGGTGG ACGCGGCGCT CGCCGCGAGT CCGGGCAGCA GGCGCCGCCG GCTGTGGCTG
CTCGCCGCCG GCGTCACTGT GATCGTCGTG TACGGGGTGG TGACGTTCCA GAAGTGGGGT
ACCGCCCCGG TGCCCACCGA CACGGTCGCC GAGTTCGTGG ATCGCAACGT GTACGTACTG
CTGGGGCTGG TGCTGCTGGC CGCCCTGCCG ATTCGCGGCA AGCCGATTCA ATCAGACACT
CTTCACGAGG CGCCCACAGG GCGCTAA
 
Protein sequence
MVEDDTRGRT ARRIVTVLAI AAVLPALYVK GKHDFFDLKI YMAAMDWWAM GNPLYDYVQP 
DRVQGELYFT YPPFGALLLS PFALLRLGAT VTIFTVLTVL AVVVTTRWLV DPVIARHNLP
RIFTLAVAVL LVLAVESTRE TITFGQINML LVVLILADLL FAVPHNGRWA GVGVGLATAL
KLYPGIFIVY LLACRKWRAA AVASATAAGA TLLAAVVLPL ESWRYWTHEL WATDRVGRTD
YTGNQSLLGL IHRLTVPQEP DRLLWLALVV VVAGYGLWRA ARAARAGDAL TGLTLTGLVG
SLISPITWPH HIYWFVPAVV VLVDAALAAS PGSRRRRLWL LAAGVTVIVV YGVVTFQKWG
TAPVPTDTVA EFVDRNVYVL LGLVLLAALP IRGKPIQSDT LHEAPTGR