Gene Strop_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1114 
Symbol 
ID5057561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1259882 
End bp1260298 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content69% 
IMG OID640473381 
Producthypothetical protein 
Protein accessionYP_001157963 
Protein GI145593666 
COG category[S] Function unknown 
COG ID[COG4405] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.883166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.860211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCG ACCTGCCACC ATACGAGTTC GCCTTCCCCG GCCCGTTGCG GGACCAACTG 
GTCGCCGCGG TGCTCGAGGG GACCAAGACC ACCACGACCG GCCTGTGTCA GGACTACGAG
ATTGACGGTG AGGCGCTACC GGTCGCGGGT GCCCAGGCGG CGGTGGTCGA TTCTGCTGGT
CGTCGGGTGG CCGTGATCGA GCTGACCGAG GTACGGGTCA GCCGGCTCGG TGACGTGGAC
CTTGACCACG CCCGGGACGA GGGCGAGGGG TACGACTCGG TCGCCGCCTG GCGGGCGGGC
CACGAGAAGT ACTGGCACGG CGTGGACTAC CGAGGGTGGC TCGGTGATCC GGACTTCACC
GTGGACGACG ACACGCCGGC TGTGCTGGAG CGGTTCCGGC TGGTGGCGAC GCTGTGA
 
Protein sequence
MIADLPPYEF AFPGPLRDQL VAAVLEGTKT TTTGLCQDYE IDGEALPVAG AQAAVVDSAG 
RRVAVIELTE VRVSRLGDVD LDHARDEGEG YDSVAAWRAG HEKYWHGVDY RGWLGDPDFT
VDDDTPAVLE RFRLVATL