| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1111 |
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| Symbol | |
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| ID | 5057558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1257427 |
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| End bp | 1258278 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640473378 |
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| Product | helix-turn-helix protein RpiR |
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| Protein accession | YP_001157960 |
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| Protein GI | 145593663 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.697199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACG GATCCGTCGT GCCCCCGGGT GACCGGGTGC TGGACCTGTT CCGCGGGGTT
CGGCTCACCC CGACGCAGCG ACGGATCGCG CACTGCCTCG TCCAGCAGGG CCCGGCGGTG
GCGTACCTGT CGGCGGCGGA GGTCGCCGAG CTGGCCGGGG TGAGCCAGCC CTCGGTGACC
CGCTTCGCGA TGGCCCTCGG CCACGACGGC TACCCCGCCC TGCGCCGCCA CCTCCGGGAG
CTGACCGCGG CACCCCGCGG CGGGCGACCG AACCCGGACA ACGAACTCCA GCAGGCGGTA
CGCGCCGAGA TCGAGAACCT GGACCGACTC GCCGACCAGT TCGCCGACCG GGACCGCGTC
GCCGCCGCCG GCCGGGTCCT CGCCGCCAGC CACCCGCTGC CGGTGCTCGG CCTCCGTGCC
GCCGCGCCGC TGGCCGCCTA CTTCGCCTAC TTCGCCGCCA AGGTACTCCC GGACGTACGG
GTCCTCGACG ACGGCGGCAG CCTGCTCACC GACCGGATCG AACAGGCCGC CGAGGCCGGT
GCGACCGCCC TGCTCGCCCT CGTGCTGCCC CGCTACCCCC GGGAGGCCCT CGACGCCCTG
CGGGAAGCCC GAACGGCGGG CCTGACCGTC GTCACCATCA CCGACTCGCC GGTCAGCCCA
GCCGGCGAAC ACGCCGACGT GGTGCTGCCC GCCGCCGTCG GCGCTCAACT CGTGTTCGAC
CTGCACACCG CACCGATGAC CCTGGCCATG GTGCTGCTCC AGGCGATCTG CGACGCCGCA
CCCGTGCAAA CCCAACGGCG GCTGGAGGCG TTCGAAGCCT CCGCCGCCCG TCGTCAGTTG
TTCCTCGGTT AG
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| Protein sequence | MNNGSVVPPG DRVLDLFRGV RLTPTQRRIA HCLVQQGPAV AYLSAAEVAE LAGVSQPSVT
RFAMALGHDG YPALRRHLRE LTAAPRGGRP NPDNELQQAV RAEIENLDRL ADQFADRDRV
AAAGRVLAAS HPLPVLGLRA AAPLAAYFAY FAAKVLPDVR VLDDGGSLLT DRIEQAAEAG
ATALLALVLP RYPREALDAL REARTAGLTV VTITDSPVSP AGEHADVVLP AAVGAQLVFD
LHTAPMTLAM VLLQAICDAA PVQTQRRLEA FEASAARRQL FLG
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