Gene Strop_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1101 
Symbol 
ID5057548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1246671 
End bp1247009 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content71% 
IMG OID640473368 
ProductthiamineS protein 
Protein accessionYP_001157950 
Protein GI145593653 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1977] Molybdopterin converting factor, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.925489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG AAGTTCGCAT CCCCACCATC CTGCGCAGTC ACACCGGCGG CGCGAAGATC 
GTCGAGGGCG CCGGCGACAC GCTGGGCGAC CTCTTCGCCG ACCTGGACAA CCGGCACGAC
GGGTTGAAGG GCCGCCTGGT GACCGACACG GGCGCGCTGC ACCGGTTCGT GAACGTCTAC
ATCAACGACG AGGACGTCCG CTTCCTGGGT GCGCTGGAGG CCAAGCTCAA CGACGGCGAC
AGCGTGACCA TCCTGCCGGC CGTCGCGGGT GGGGCCCTCG GCTTCGCCGC GGTGGCCGCC
ACCCGCGGCC TGCGTGCCGG GTCACTCCCC GTCCGCTGA
 
Protein sequence
MAIEVRIPTI LRSHTGGAKI VEGAGDTLGD LFADLDNRHD GLKGRLVTDT GALHRFVNVY 
INDEDVRFLG ALEAKLNDGD SVTILPAVAG GALGFAAVAA TRGLRAGSLP VR