| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1096 |
|---|
| Symbol | |
|---|
| ID | 5057543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1243225 |
|---|
| End bp | 1243806 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640473363 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001157945 |
|---|
| Protein GI | 145593648 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.843144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.731728 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG CATTGGTTAT TGTGGATGTG CAGAACGACT TCTGCGAGGG CGGTTCACTC
GCCGTCGGCG GCGGAGCCAG CGTCGCTGCC GGTGTGAGCC GGCTCCTCAC CACCGAGCCA
GACCGTTGGG ACCACGTGGT GGCGACGAAG GACTACCACA TCGATCCCGG GGCGCACTTC
GGCGACCCAC CAGACTTTGT CGACTCGTGG CCCGCACACT GCGTGGTAGG GACGCCCGGC
TCGGAATTCC ACCCCGATCT TGCCACCGAG CGAATCGAGG TGATCTTCCA CAAGGGCGAG
CACGCCGCCG CGTACTCCGG CTTCGAGGGA CACACGGACC AGGGTGAGTG CCTGGCCGAC
TGGCTCCGGC GGCACGATGT CGACCAGGTG GAGATCGTCG GGCTCGCCAC CGACTTCTGT
GTCCGGGCCA CCGCCCTGGA CGCCGCCGAG GAGGGGTTCC GGACCACCGT CCGACTGGAC
CTGACCGCCG CCATCGGGCC CGAAACGGCT GACGAGGCAC TGCGGGCATT CAGCGACGCC
GGGATCACCA CCCAGGGAAC GCCTGTGATC AGGGCCGCAT GA
|
|---|
| Protein sequence | MSNALVIVDV QNDFCEGGSL AVGGGASVAA GVSRLLTTEP DRWDHVVATK DYHIDPGAHF
GDPPDFVDSW PAHCVVGTPG SEFHPDLATE RIEVIFHKGE HAAAYSGFEG HTDQGECLAD
WLRRHDVDQV EIVGLATDFC VRATALDAAE EGFRTTVRLD LTAAIGPETA DEALRAFSDA
GITTQGTPVI RAA
|
|---|
| |