| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1075 |
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| Symbol | |
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| ID | 5057522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1220539 |
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| End bp | 1221258 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640473342 |
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| Product | Ricin B lectin |
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| Protein accession | YP_001157924 |
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| Protein GI | 145593627 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.150797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCT CCGCGCAACG CCCCGACCGG GCCGGCACCG TCTACCACCG CCCCGGCGCC
ACCCGTCCCC GGCTACCCCG CGATCCGCTG ATGTGGGGGG CGGCGCTCGT CGGCGTCGCC
GGCCTCCTAC TCGGGGGGTT CTTCGTCCTC GGTGGTCCGG GGGGCGGCGG CACTCCAGCC
GTCCCGGCGG TGGCCGCGAC CGGGTCGACC GGCACATCGA CCCCGGCGGC GCAGGAGCCG
TCCGCCCCAC CAACCGTGGG GACCAGTTCC CCGACGTCCA CCCCGTCCAC CGCGCCGGCC
CAACCCACCG GCCCGACGGT GTTTCGCCAG GTGGCGTCGG GCCGTTGCCT GGGCATCGAC
GGAGACGGCG CGCAGGCGAC CGCGAAACTC CTCGACTGCC GCGGCGACGA TTCGCGACAG
CGGTGGCTCC CCAAATCCAT CGGCTCCGGC CTGGTAGCCC TGGTCAACCA GGCCTCGAAC
ATGTGCCTCG ACGTCGAGGG CGCCAACGCC GACGACGGGG CGAGGCTTCA GCAGTACCCC
TGCCACGGCG AGGCCAACCA GCAGTGGCGG CTCGTACCCA CCGCCGGTGG TCCGGTGCTG
ATCGCGGCGC TGCACAGCGG CCGGTGCGCG TACCCGGACG CCGGCAGGCC CGACGCCGGT
ACCGAGATCC GGCAGACCAC CTGCGTCGAC ACCCCCGACC AACAGTGGCA GCTCGGCTGA
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| Protein sequence | MSASAQRPDR AGTVYHRPGA TRPRLPRDPL MWGAALVGVA GLLLGGFFVL GGPGGGGTPA
VPAVAATGST GTSTPAAQEP SAPPTVGTSS PTSTPSTAPA QPTGPTVFRQ VASGRCLGID
GDGAQATAKL LDCRGDDSRQ RWLPKSIGSG LVALVNQASN MCLDVEGANA DDGARLQQYP
CHGEANQQWR LVPTAGGPVL IAALHSGRCA YPDAGRPDAG TEIRQTTCVD TPDQQWQLG
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