Gene Strop_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0970 
Symbol 
ID5057414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1088293 
End bp1088997 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content77% 
IMG OID640473239 
Producthypothetical protein 
Protein accessionYP_001157824 
Protein GI145593527 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.288452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.841121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGCC TTGGCCGAGT CGTCCAGGAC CTTGGTGCAC TGGTGTTGCC GGTGGAGTGC 
GCCGGATGTC GGGACCGACG GCCCGGGCTG CGGCAGGGTG TCTGCCCGGA GTGCGTCGCG
GCGCTGGGCG ACCTGCGTCC GCAGCCGGTG CGTCCGACTC CGGCTCCGCA GGGCCTGCCG
CCGTGCGTGG CTCTCGGCCC CTACACGGGC CCGCTGCGCG AGGTGCTGCT CGCCTACAAG
GACCATGGCC GGCACGGGCT GGCTCGGCCG CTGGGCGCGC TGCTCGCCGA GGTGGTGGCG
GTCGCGGTCG GCCCGGTGCG TCCGGTGTTG CTGGTGCCGG TGCCGGACAC GCCGGCGGCG
GCCCGGGCCC GGTACGGCGA CCACCTCAGC CGGTTGGCCC GGCACTGCGC GGGCCGGCTG
CGGCGGGCCG GCTGGCCGGT CGAGGTTCGT TCGGCGTTGC GGGCGCTGCC CCGGCCAGAC
TCGGTGACGC TGGACAGCGC GGGCCGGGCG GCGTCGGCCG CCGCGGCGTT TCGGACCCGG
CGCCGGTGGC GGCCAATGCC GGCGGGTGTG GCCCTGGTCG TCGTGGACGA CATCGTCACC
ACCGGTTCGA CGCTCGCCGC GGTGAGTCGG GTGCTGACCG CGACCGGCCG GGTGCCGACG
GTTGCGGCGG TGCTCGCCGC GACCGAGAAG AGGCGCCACC GGTAA
 
Protein sequence
MRGLGRVVQD LGALVLPVEC AGCRDRRPGL RQGVCPECVA ALGDLRPQPV RPTPAPQGLP 
PCVALGPYTG PLREVLLAYK DHGRHGLARP LGALLAEVVA VAVGPVRPVL LVPVPDTPAA
ARARYGDHLS RLARHCAGRL RRAGWPVEVR SALRALPRPD SVTLDSAGRA ASAAAAFRTR
RRWRPMPAGV ALVVVDDIVT TGSTLAAVSR VLTATGRVPT VAAVLAATEK RRHR