Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0970 |
Symbol | |
ID | 5057414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1088293 |
End bp | 1088997 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640473239 |
Product | hypothetical protein |
Protein accession | YP_001157824 |
Protein GI | 145593527 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.288452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.841121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGGCC TTGGCCGAGT CGTCCAGGAC CTTGGTGCAC TGGTGTTGCC GGTGGAGTGC GCCGGATGTC GGGACCGACG GCCCGGGCTG CGGCAGGGTG TCTGCCCGGA GTGCGTCGCG GCGCTGGGCG ACCTGCGTCC GCAGCCGGTG CGTCCGACTC CGGCTCCGCA GGGCCTGCCG CCGTGCGTGG CTCTCGGCCC CTACACGGGC CCGCTGCGCG AGGTGCTGCT CGCCTACAAG GACCATGGCC GGCACGGGCT GGCTCGGCCG CTGGGCGCGC TGCTCGCCGA GGTGGTGGCG GTCGCGGTCG GCCCGGTGCG TCCGGTGTTG CTGGTGCCGG TGCCGGACAC GCCGGCGGCG GCCCGGGCCC GGTACGGCGA CCACCTCAGC CGGTTGGCCC GGCACTGCGC GGGCCGGCTG CGGCGGGCCG GCTGGCCGGT CGAGGTTCGT TCGGCGTTGC GGGCGCTGCC CCGGCCAGAC TCGGTGACGC TGGACAGCGC GGGCCGGGCG GCGTCGGCCG CCGCGGCGTT TCGGACCCGG CGCCGGTGGC GGCCAATGCC GGCGGGTGTG GCCCTGGTCG TCGTGGACGA CATCGTCACC ACCGGTTCGA CGCTCGCCGC GGTGAGTCGG GTGCTGACCG CGACCGGCCG GGTGCCGACG GTTGCGGCGG TGCTCGCCGC GACCGAGAAG AGGCGCCACC GGTAA
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Protein sequence | MRGLGRVVQD LGALVLPVEC AGCRDRRPGL RQGVCPECVA ALGDLRPQPV RPTPAPQGLP PCVALGPYTG PLREVLLAYK DHGRHGLARP LGALLAEVVA VAVGPVRPVL LVPVPDTPAA ARARYGDHLS RLARHCAGRL RRAGWPVEVR SALRALPRPD SVTLDSAGRA ASAAAAFRTR RRWRPMPAGV ALVVVDDIVT TGSTLAAVSR VLTATGRVPT VAAVLAATEK RRHR
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