Gene Strop_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0950 
Symbol 
ID5057394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1066152 
End bp1067498 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content69% 
IMG OID640473220 
Producthypothetical protein 
Protein accessionYP_001157805 
Protein GI145593508 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.927487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.694624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATG CCACCGACCA CCTCTGGATG CACTTCACCC GAATGGCGAG CTACTCCGCC 
GGTGAGGTCC CGACGATCGT GCGCGGCGAG GGCGCGTACG TCTGGGACAC CCAGGGGCGG
CGCTACCTGG ACGGGCTCGC CGGCCTCTTC GTCGTCAACG CCGGACACGG CCGGACCGAG
CTAGCCGAGG CCGCCGCTCG CCAGGCGGGC GAGCTGGCGT ACTTCCCGCT CTGGTCGTAC
GCGCACCCCA GGGCCATCGA ACTGGCGGAG CGGATCGCCG CCCTGACCCC CGGCGACCTC
AACCGGGTCT TCTTCACCAC CGGCGGCGCG GAGTCCGTCG AAGCGGCGTG GAAGCTGGCC
CGGGCGTACT TCCGGCGCAC CGGCAGGCCG GCGAAGTACA AGGTGGTCAG CCGCCACATC
GCCTATCACG GCACGTCGAT GGGCGCACTG TCGATCACCG GGCTGCCCGA GCTCCGGCGT
GACTTCGAGC CCCTGGTGCC CGGCGGCATC AAGGTACCCA ACACCAACTT CTACCGGGCC
CCCGAGCACG GCGACGACCC CGAGGCGTTC GGCCGCTGGG CCGCCGAGGA GATCCGCCGA
GCCATCGAGC GAGAAGGCCC GGAGACAGTC GCCGCGGTCT TCCTGGAGCC GGTGCAGAAC
TCCGGCGGTT GCTTTCCGCC CCCACCCGGC TACCTGAGCC GCGTCCGCGA AATCTGCGAC
GAGCACGACG TCCTGCTCGT CTCCGACGAG GTGATCTGTT CGTGGGGGCG GCTCGGCGAG
TACTTCGGCG CGGTCCGCTA CGGCTACCAG CCCGACATCA TCACCACTGC CAAGGGCATC
ACCTCTGGGT ACGCCCCACT CGGCGCGATG ATCGCCGACG ACCGGCTGAT GGAGCCGTTC
CTCACCGAGA CCGGCGTCTT CGCCCACGGC GTGACCTTCG GCGGGCACCC GGTCTCCTGC
GCGGTGGCGC TGGCCAACCT GGAGGTCCTC GCCCGCGACG ACCTGATCGG TCACGTACGG
GCCAACGAGG CGACGTTCCG GGCCACCCTG GAACGGCTGC ACGAGCTGCC GATCGTCGGC
GACATCCGGG GCGACGGGTA CTTCTACGGC ATCGAGCTGG TCAAGGACAA GACAACCAAG
GAGACCTTCG ACGAGACGGA CTCCGAACGG CTGCTGCGCG ACTTTCTCTC CCCCGCACTC
TTCCACTCCG GCCTCTACTG CCGCGCCGAC GACCGGGGCG ACCCGGTGGT GCAGCTCGCG
CCACCGTTGA TTGCCGGGCC AGAGCAGTTC GACGAGATGG AACAGATCCT GCGAGCTGTC
CTCACCGAGG CCTGGTCCCG GCTGTAG
 
Protein sequence
MANATDHLWM HFTRMASYSA GEVPTIVRGE GAYVWDTQGR RYLDGLAGLF VVNAGHGRTE 
LAEAAARQAG ELAYFPLWSY AHPRAIELAE RIAALTPGDL NRVFFTTGGA ESVEAAWKLA
RAYFRRTGRP AKYKVVSRHI AYHGTSMGAL SITGLPELRR DFEPLVPGGI KVPNTNFYRA
PEHGDDPEAF GRWAAEEIRR AIEREGPETV AAVFLEPVQN SGGCFPPPPG YLSRVREICD
EHDVLLVSDE VICSWGRLGE YFGAVRYGYQ PDIITTAKGI TSGYAPLGAM IADDRLMEPF
LTETGVFAHG VTFGGHPVSC AVALANLEVL ARDDLIGHVR ANEATFRATL ERLHELPIVG
DIRGDGYFYG IELVKDKTTK ETFDETDSER LLRDFLSPAL FHSGLYCRAD DRGDPVVQLA
PPLIAGPEQF DEMEQILRAV LTEAWSRL