Gene Strop_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0948 
Symbol 
ID5057392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1065149 
End bp1065598 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content71% 
IMG OID640473218 
Producthypothetical protein 
Protein accessionYP_001157803 
Protein GI145593506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.612685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCC CGGAACACCG CCGCCCCGGC ACCGGACGAC GCACTCGCCG CGACCGTCAC 
GGACGTGGCC TGCGCGGCCG CCTGGTGCCC GCGACGGTGC CGCTGGCGCG AACGAAGGCC
GAGGTCTTCG ACGAACTGGT GCTGGACACG GTGGAGACAC TCGAGCGGCG GTTCGCCAAG
GAACTGGCCG GCGTCGAGTT CGCGGTGGAG GACGTGCCGC CGCAGCTGAA TGTCTACGAC
TCCGACGTGC TCGAGGACGG CGCGGTGCCC CTCGCCCGCC TCCTGCCCGG GCGACCGGGC
CGGCAGGAGA TGCCGCCACG GATCGTCCTC TACCGCCGGC CACTCGAGTT TCGGGCGATG
GACCGTGAGG ACCTGGCGGA TCTCGTCCAC GACGTCATCA TCGAGCAGGT GGCGAACCTG
CTCGGGGCCG ACCCGGACGA GTTGGCCTGA
 
Protein sequence
MASPEHRRPG TGRRTRRDRH GRGLRGRLVP ATVPLARTKA EVFDELVLDT VETLERRFAK 
ELAGVEFAVE DVPPQLNVYD SDVLEDGAVP LARLLPGRPG RQEMPPRIVL YRRPLEFRAM
DREDLADLVH DVIIEQVANL LGADPDELA