Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0936 |
Symbol | |
ID | 5057380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1050931 |
End bp | 1051449 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640473206 |
Product | thioesterase superfamily protein |
Protein accession | YP_001157791 |
Protein GI | 145593494 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.981249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGT ATCCCGCCAT CACCGCACCG GGCAGGCCGA CCGCATACTC CCGGGTCACG CTGAGTCGAA TCATGACAGC CGTCGATGTA AACCTCTACG GCACCGTGCA CGGCGGAGTG CTGATGAAGT TCGTGGACGA CGTCGCGGGG GCCGCCGCCG CCCGGCACAG TGGCGGGACG GCCGTGACCG CGGCGATTGA CGAGATCGTC TTCTCTGAAG CGGTGCGGGT CGGGGACTTG GTGCACGCGT ACGCCCAGGT CAATTGGGCC GGGCAGACCT CGATGGAGGT CGGGGTGCGG GTCACCGCCG AACGATGGGA CTCGGCCGAG GGAGAACCGG TGCGGGTCGC CACCGCGTAC CTCGTCTTCG TCGGCGTCGA CGCCGGCGGC AGCCCTCGCT CGGTCCCACC GGTAGCCCCG GAGACCGTTA CGGACCAGCG GCGCTTCCGA GAGGCGGAGA TTCGGCGGGC GCACCGACTC GCCCGTCGTC GGGCGATCCA GGCACACCGG GACGGCTGA
|
Protein sequence | MTEYPAITAP GRPTAYSRVT LSRIMTAVDV NLYGTVHGGV LMKFVDDVAG AAAARHSGGT AVTAAIDEIV FSEAVRVGDL VHAYAQVNWA GQTSMEVGVR VTAERWDSAE GEPVRVATAY LVFVGVDAGG SPRSVPPVAP ETVTDQRRFR EAEIRRAHRL ARRRAIQAHR DG
|
| |