| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0887 |
|---|
| Symbol | |
|---|
| ID | 5057330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 995130 |
|---|
| End bp | 996794 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473156 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157742 |
|---|
| Protein GI | 145593445 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTCAG CCGACGATCC GTTCGGCCGG CACCCGGTTA GGGTCGGGGA CATGTTTGTC
GAGCGCGCTG AGCGGATCAT CGACGCGTTG CTGGAGAGCC GGCCGGGGTT GGCCGCCGCG
GCCGGGGACC ACCGGTACGA CGACCGGTTG CCGGACTGGT CCACCGACCA CGTGGCCGCG
GACCGGGAGA TGCTGCGTGA GGCTGGAGAC GCTCTGGCCG AGGTGGACCC GGAATCCCTG
CCGGTCGCGG AGTCGGTAGA CCATGCTCTG CTCAGCGCGC TTGTCGACCG GGAGCTTTTC
GAGTCGACCG AGATCCGGGC GCACGAGTGG GATCCGCTGT GCCACAACCC GGGCATGCTG
CTGCACGCCC TGCTCGCCCG CCCATACGCC CCCGCCGAGG TGCGGCTGAC CCACCTGGCG
GGTCGGCTGG CCGCCGTACC GGACGCGCTG GCGACCGCAC GTAGGACGCT GAGCGACATT
CCACGCATCC ACGCCGAGAC GGCGGTGGGG CAGTTCCTCG GCACGGCCGC GCTGATCCGG
GACCAGGTTC CGGTGCTGTT GGCCGAGGCG CCGACGCTGC GGGGCCGTGT CGAGCCGACA
GCCCGCGCGG CGGCGACGGC CTGCGCCCAG TTCGCCGACT GGCTGCGGGC CGGGCCGGCC
GCCACCGCGG AACCGGGCCG GGACCCCCGG CTCGGGCGGC GCCGCTGGGA GGCGCGGCTC
TGGCACACAC TGGACACCGA GCTGACCGCC GCTGAGGTGC AGCGCCGGGC CTGGGCCAAC
CTGGAGCGGG TGACCGAGGA GATCCGCGCG GCGGCCGCCG AGTTGGTCGG TGGTCCGACC
GACGACGAGA CGGTACGCCG GGCGCTGGAC CTGCTCGCCG CCGAGCATCC GGATGACCAC
ACCATCGTCG AGCTGGCCTC GGTCACCCTG GACGAGGCGA CCGACTTCGT CCGGGCACAC
GATCTGGTCA CGTTGGTCGA CGATCCCTGT GTGATCCAGG AGATGCCCGA ATTTGCGCGG
GGTGTGGCGG TGGCGTACTG CGACTCACCG GGCGCGCTGG AGACGGCGAA CGTGCCGACG
TTCTACTGCA TCGCGCCCAC GCCTTCCGAG TGGCCGGCGC ACCGGGTGGA GTCGTTCTAC
CGCGAGTACA ACGACCACAT GATCCGTAAC CTGACCGTGC ACGAGGCGAT GCCGGGGCAC
TTCCTTCAGC TCGCCCACGC CCGCCGGTAC GCCGGCGGCA GCCCGGTCCG CGCGGTCGCC
CGGTCCGGCC CGTTCGTCGA GGGCTGGGCG GTCTACGCCG AGGAGGTGAT GGTCCGAGCC
GGTTTCGGCG GCCTTCCGGT CCGGTTACAG CAGTTGAAGA TGCAGCTACG GATGACCCTC
AATGCACTGC TCGACCAGTT GACCCACTGC GAGGAGCTGG CCGAGGCGGA GGCGATGGCG
CTGCTGACCG GGCGGGGTTT CCAGGAGGAG GGTGAGGCGG CGGGCAAGTG GCGGCGGGCC
CTGCTGACCT CGACGCAGCT CTCCACGTAC TTCGTCGGGT ACTCGGAGGT CGCCGAGATC
GCGGCCGCCC GCCCGGTGGG GGTTTCGGTG CGGCGCTGGC ACGACGGGAT GCTCGCCCAC
GACTGCCCGC CACCCCGACA TCTGCGTACC TTGCTCGGAA TCTGA
|
|---|
| Protein sequence | MTSADDPFGR HPVRVGDMFV ERAERIIDAL LESRPGLAAA AGDHRYDDRL PDWSTDHVAA
DREMLREAGD ALAEVDPESL PVAESVDHAL LSALVDRELF ESTEIRAHEW DPLCHNPGML
LHALLARPYA PAEVRLTHLA GRLAAVPDAL ATARRTLSDI PRIHAETAVG QFLGTAALIR
DQVPVLLAEA PTLRGRVEPT ARAAATACAQ FADWLRAGPA ATAEPGRDPR LGRRRWEARL
WHTLDTELTA AEVQRRAWAN LERVTEEIRA AAAELVGGPT DDETVRRALD LLAAEHPDDH
TIVELASVTL DEATDFVRAH DLVTLVDDPC VIQEMPEFAR GVAVAYCDSP GALETANVPT
FYCIAPTPSE WPAHRVESFY REYNDHMIRN LTVHEAMPGH FLQLAHARRY AGGSPVRAVA
RSGPFVEGWA VYAEEVMVRA GFGGLPVRLQ QLKMQLRMTL NALLDQLTHC EELAEAEAMA
LLTGRGFQEE GEAAGKWRRA LLTSTQLSTY FVGYSEVAEI AAARPVGVSV RRWHDGMLAH
DCPPPRHLRT LLGI
|
|---|
| |