Gene Strop_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0859 
Symbol 
ID5057302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand- 
Start bp962357 
End bp963049 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID640473128 
ProductGtrA family protein 
Protein accessionYP_001157714 
Protein GI145593417 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.136831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTG TCCGCCTCCT GCCCGAGCGC TGGCAGAAGT TCGTCAACGA GGCGCTCAAA 
TTCGGCATCG TCGGTGGCGT CAACACTGTC ATCAATTACG CGGTGTTCAA CGCCCTCGCA 
CTCACCGTTT TCCAGGGCGG CGCCCTGAAG GCGACGGTCG TCGCCACTGT CACGGCAACG 
ATCACGTCGT ACCTCATGAA TCGTCACTGG ACGTACCGTG ATCGTCCAAA AACAGCCGTT 
AGGCGCGAGT ATGCCCTTTT CTTCCTCTTT AATGGTGCGG GGCTCCTCAT CGAACTGGGC 
GTGCTGACGG CGGCCAAGTA CGGCCTCGGG GTGACCAGCC TGCTCGCCCT CAACCTCGCC 
AAGACCATGG GTGTGGTGCT GGCGACGCTG TTCCGGTTCT GGTCCTACCG AACATTCGTC 
TTCCAGCCCG CGCCAGCGCC GGCCGCGAAC AACTGGCACA GCATCCCCCG CGACGAGTGG 
GACACCATGG CCGAGATGGA TCCGGTCGCC GAGCTGGCGG AGTCGGTCTC GGAACTGGAG 
GAAGCCGCCC CGCCACCCGG CACCCACCAC CACCGCACAC CGATCCAGGG CCTGACCATC 
CCACTGGACG CCCGCCTCGA CCTGGACCGG GAGCTGGCGG CCGAGCTCGC CGCGGAACTC 
CAGGCGAGCA CCCGCCGGCC CCGTCGCCCC TGA
 
Protein sequence
MRLVRLLPER WQKFVNEALK FGIVGGVNTV INYAVFNALA LTVFQGGALK ATVVATVTAT 
ITSYLMNRHW TYRDRPKTAV RREYALFFLF NGAGLLIELG VLTAAKYGLG VTSLLALNLA 
KTMGVVLATL FRFWSYRTFV FQPAPAPAAN NWHSIPRDEW DTMAEMDPVA ELAESVSELE 
EAAPPPGTHH HRTPIQGLTI PLDARLDLDR ELAAELAAEL QASTRRPRRP