Gene Strop_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0829 
Symbol 
ID5057272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp923870 
End bp924502 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content72% 
IMG OID640473098 
Producturacil phosphoribosyltransferase 
Protein accessionYP_001157684 
Protein GI145593387 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0684126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGTAC ACGTCATTGA CCACCCGCTT GCCCAGGCGC GGCTGACCGC GATGCGCGAC 
GCCCGGACGG ACTCGGCCTC GTTCCGCGCC GCGCTGCACG AACTCACCAC CATGCTGGTA
TACGAGGCGG CCCGCTCCTT CCCCGTCGAG CGCTACCCGG TGCAGACCCC GGTCACCGAC
ACCCAGGGCA CCCGACTCGC CAATCCGCCG CTGCTGGTGC CGGTGCTGCG CGCCGGCCTC
GGCATGGCCG ACGCCGCGCT GGGCCTGCTG CCGGAGTCGT CGATGGGCTT CGTCGGCCTG
GCCCGGGACG AGGAGACCTT CGAGCCGCGC GCGTACATGG AGTCGCTCCC GCCTGACCTC
ACCGGGCTGC CGGTGCTGGT GCTCGACCCG ATGCTCGCCA CCGGTGGCTC GTTGGAGCAC
TGTTGCCGGC TGCTCGCTGA TCGGGGGTGC ACCGACATCA CTGTGCTCTG CGTGCTCGCC
GCGCCTGCCG GAATTGACCG GCTGGACCGC TCAGGTCTGC CCCTGCGCCT GGTGACGGCC
GCGGTCGACG AGGGCCTCAA CGACCGTCGG TTCATCGTCC CCGGCCTGGG TGACGCCGGT
GACCGGCAGT TCGGCGGGAT GCCCCGCTTC TGA
 
Protein sequence
MEVHVIDHPL AQARLTAMRD ARTDSASFRA ALHELTTMLV YEAARSFPVE RYPVQTPVTD 
TQGTRLANPP LLVPVLRAGL GMADAALGLL PESSMGFVGL ARDEETFEPR AYMESLPPDL
TGLPVLVLDP MLATGGSLEH CCRLLADRGC TDITVLCVLA APAGIDRLDR SGLPLRLVTA
AVDEGLNDRR FIVPGLGDAG DRQFGGMPRF