| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0820 |
|---|
| Symbol | |
|---|
| ID | 5057263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 912085 |
|---|
| End bp | 914319 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640473089 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157675 |
|---|
| Protein GI | 145593378 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.931123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0681477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCTCG TGCGCGTGTA CTGCGGTCTG GCCTCGGCGG ATCCGGCCGA GCGGCCAGCT
TCGGTCGGCT CGACGCTGAC ATCCGCTGTA GTCGACGACG CTGGTCGTCT GCTGCACGTC
TGCGAGATCA GCGACGACCC CGCCGGCTAC GCCCAGTTGG TCACACTGAT GGTGGAGCGA
TCGGGCGGGC CCAGCGGCGC GGCGATCGCC GCCGACAACG ACGACCACAC GGTCACCTCC
CTCGTCAGCG CCGCTGGTCG TCCACTGGCG GTCGCCGACG ACGACTCGGT GGACGACTTC
GCCGAACGGT TCGCCGACGA CGATTCCCCG GAGGAGATGC AGGCGCCACC GGTGCAGCGA
CGGGCCGTCG GTCTCGCCCG CGCCCTGCAA GCCGGCGCGC TCTCCGCCGT CGCGCTCCCC
GCTCCTCGGG ACCTGGCCGG TTACAAGCCG GTACTCGCCG CACACGCCGC GCTCGCCAAC
GGCCGGCACT CGGCCGCGGT CGCGCTGCGG GAAGTGCTGC GAGAGCTCTT CCCGGCGGCC
CTACAGGCCT ATCCTGACCC GGCCGAGCCG GTTGCGCTGG CGGTGCTGGA CGCCCTTCCC
GAGCCCGGGA TGCTGGCCAG CACGGGGCCC GACAATCCGA CCGACCGGGT CGTCGCGGAC
CTCACCGCCG CAGGCGTCGC CGCACCCGAG GTGATCGAGG CGGCGATCAC CTCCCTCCGG
GTCGCGGTCT CCGAGACCCC GCGCCGCGCC TCGGTCAACC GGACCCTCAC CTCGGCGGTC
TCCACGACCG TCCGGCAGGC CGTCGCCGCG GTCCGAGCCT GCGACGTCGG TTGCGAGGCA
CTGGTCGGTG TGCTTCACGA CCGGGCGGGC ACCTCCGTGG CGGGCCGCCG GGCCACCGCC
CGACACGGTG CGTCGATCGA CGAACCGGCG TCCGCCAGCG CCGCCCTGCC CACCCGGCCG
GCTGGCGTCC GCCGGTCCCG GCCAGAGCCG ATGCCGAGCC AGAGCGCCCC GCCGGCCCCG
CGCCCGCTCG GCCCCCCACC GGTCGCGCCG ATGCCGGTCG CACCCCCACC GGTGGCCCCG
GAGCCGATCG CACCCGCAGC CGTGGCCGGT CCGCCGGTCT CCGCGGCGCC GGCTCAGCCG
GAGGCGCCGC CAAGCCCTGT TGACGGCCCG ACGAACCGCC CCATCTCGTC GCCCGGCAGC
GCCCCCGCCC CGCCGTCGCA GCGCGGCTCG AGCTCGCCAG CGGAGGCGGG TGAGCCGTTC
CGGGCAACGT TGACCACGGC GGCGATCCAG AGTGCCCGCG CTGAGCGGCA GCGCACCGTC
ATCCCGCCAC GACCCAACAC GAAGTCCGAA CCGCCGACAC CGAGCGGCGG GTTCAGCGCG
ACCGACCTCA GCGTGCCGGT GCCCACCCCG CGCCCCAGCC GCGAGACCGC TCCCCCGGGC
TCGCGGGCGA ACTGGCCGCT GGTCAACAAC CCGGACCCGA CGGACGGTTC CGCGGGTACC
CCGATGGCCG ACTCGTACGG TGGACAGGGG GTGGACGCCC CGACCGATCC GGGTACGGAA
CATCGAGTTC CACCGCCGTG GCTGGCCGAA GACATGCCGC AGGAGCCACC GGCGCTGCGC
CTGGTCGAGC CGCCACCACT GGCTGACCGG GCGCTGCGCG ACGGAGTTGA CCCGCAGCTC
GAGACGCCAC CGCTCCGCCT CGTTGACCGG GTTGAACCCC GCAGCCACCG GCCCACCGGG
CAACAGGTGC CGCCGGTCGA GCACCGTCCC CCACCGGTCG CCGACGACGG AGACGGTGAC
GGGGACCTGC TCATCTTCGC CCAGGCGAAA TCGGCTTGGT TCGTCGGTCA GAGCGAGGAC
GACGAGGTGG ACTGGTCGTC GCTGAACGAC ACCGGTTGGC AGGCGGCGGA GCAGGCAGCG
GAGCAGGCAG CGCAGCCGAC GGCCAACTCC GAGACCGCAG CGGGCCTTCC CATTCGGGTG
CCGCAGGCCA ACCTGGTCCC CGGTTCACCA AAGCGGGACG AGCGTCCGCT GCGGATTGTT
CGGGATCCGG CCAGCCTCGC CGAGAACACC ACCGGTTACT TCCGCGGCTG GCGTCGCGGT
CAGGAGATCG GCGGTTTTGC GGTCGGCGGG CGTCCGGGGC GCGAAGCCGC TGGCGGCTGG
GACTTCACCC GTGACACCGG AGACCGTGAC GAGGAACGGA AGTACGAGTA CCGCTCGGCC
GGGTACCGGT CCTGA
|
|---|
| Protein sequence | MALVRVYCGL ASADPAERPA SVGSTLTSAV VDDAGRLLHV CEISDDPAGY AQLVTLMVER
SGGPSGAAIA ADNDDHTVTS LVSAAGRPLA VADDDSVDDF AERFADDDSP EEMQAPPVQR
RAVGLARALQ AGALSAVALP APRDLAGYKP VLAAHAALAN GRHSAAVALR EVLRELFPAA
LQAYPDPAEP VALAVLDALP EPGMLASTGP DNPTDRVVAD LTAAGVAAPE VIEAAITSLR
VAVSETPRRA SVNRTLTSAV STTVRQAVAA VRACDVGCEA LVGVLHDRAG TSVAGRRATA
RHGASIDEPA SASAALPTRP AGVRRSRPEP MPSQSAPPAP RPLGPPPVAP MPVAPPPVAP
EPIAPAAVAG PPVSAAPAQP EAPPSPVDGP TNRPISSPGS APAPPSQRGS SSPAEAGEPF
RATLTTAAIQ SARAERQRTV IPPRPNTKSE PPTPSGGFSA TDLSVPVPTP RPSRETAPPG
SRANWPLVNN PDPTDGSAGT PMADSYGGQG VDAPTDPGTE HRVPPPWLAE DMPQEPPALR
LVEPPPLADR ALRDGVDPQL ETPPLRLVDR VEPRSHRPTG QQVPPVEHRP PPVADDGDGD
GDLLIFAQAK SAWFVGQSED DEVDWSSLND TGWQAAEQAA EQAAQPTANS ETAAGLPIRV
PQANLVPGSP KRDERPLRIV RDPASLAENT TGYFRGWRRG QEIGGFAVGG RPGREAAGGW
DFTRDTGDRD EERKYEYRSA GYRS
|
|---|
| |