Gene Strop_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0713 
Symbol 
ID5057154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp798574 
End bp798990 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content66% 
IMG OID640472980 
Producthypothetical protein 
Protein accessionYP_001157568 
Protein GI145593271 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.419426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGACA ACCTGAACTG GTGGGAGATC GGTGCGCTGC TGCTCCTGGC GCTGCTGATC 
TTCGGTGACC GGCTACCCGC GGTCATCAGT GACGGTCTGC GGATGGTGCG TAACCTGCGC
CGGATGGCGA CCAACGCCAC CACTGACCTG AGCCGGGAAC TGGGCACCGA CATTCAGCTC
CAGGACCTGC ATCCGAAGGC ATTCGTTCGC AAGCATCTGC TCAGCGAGGA GGATGAGGCG
GCGATCCGGA AGCCGTTGCA GGGGGTCTAC GACAACCTGC GGGCCGATGT CGCCAGCGTG
CACGAGGAGC TGAAGGACGT CGCCACCGCC GTTGACCCGG CAAGCCGTCC GGGTAAGGCG
ACCGGCGGTG CATCGCCCGC GCCCGTTCCT CGGGTCAGCT ACGACGACGC GACCTGA
 
Protein sequence
MFDNLNWWEI GALLLLALLI FGDRLPAVIS DGLRMVRNLR RMATNATTDL SRELGTDIQL 
QDLHPKAFVR KHLLSEEDEA AIRKPLQGVY DNLRADVASV HEELKDVATA VDPASRPGKA
TGGASPAPVP RVSYDDAT