| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0673 |
|---|
| Symbol | |
|---|
| ID | 5057114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 756487 |
|---|
| End bp | 759678 |
|---|
| Gene Length | 3192 bp |
|---|
| Protein Length | 1063 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640472940 |
|---|
| Product | amino acid adenylation domain-containing protein |
|---|
| Protein accession | YP_001157528 |
|---|
| Protein GI | 145593231 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.372789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGA CTGCCGGGAC GAAGCTCGCG ACGGCAACCG CCCCGGCGCG GTTGCCGATC
ACCGAGTCGC AGAAGGGGCT GCTGGTCGTC AATGAACGCT CGCCAGGGCG CGCTGTATAC
AACCAGCTCG TCCGGTTCGA CATCGACCCG TCGGTCCCCG ACGAGATGAT CGAGCGCGCG
CTCGTAACAG TGGTCGCAGT CCAGCCAGCC ATGCGTCAAG TCTTCGGGCT GCTACCCGAA
ATGCACGTCC GACTCACCCC GCCCCCGGGG CCGCAGGACT TTCCGCTCGA ATGGGTCACG
GCCCGGCAGC GTGACTTCGA AGAGGCGGTC GGCGCGGCTC AACGACGGAT CGGCCGACCT
GAATTCGACC TAGCCAACGG CCCCGCCTAC CGTTTCGCCG TCGTTCGCTG CCTCGATGAG
CCCCGCGTAG CGGTGCTCAT GTGCGACCAC CACATCATCC TCGACGGCGT TTCGATGGGA
CCTCTCGTAC GGGACCTTCA GGAGGCGCTG TCCGGACGCC TCGCCGGGGC GGAGATCGAG
CAGCGGCGCA GCGCCCGCGA GACGGCCTTC GTCAAGGAGT TGGCGGCGCA GAACCGCACC
GCCACCTCCG ACCGTGTCGT CGAACGGTCT CGAGAGTGGG CGGCCCGGCT GCGGGAGGTC
CCGCCGCTTG TGCTGGCACC CCTGCCTGGT CGCGCCGTGC AGACGGAATT CACCGGCGCC
CGCGTCGGCT GGCACCTCAG CCAGGACGAG ACCGCCGCGC TATCGGAAAC CTGCCGACGG
CTGGAGATCT CACCGTTTGT CTTCTTCTCC GGTATCTACG GCACGGTACT GGCCCGGCAC
GGCAACGTAT CCCGCGTGTT GGTCGGCAGC CCATTCATGG CCCGCCGCAC GATCGGCGCG
TTCGAACTCG GCGGCTTCTT CGTCAACACG CTTCCGGTCA CCGTCGACGT GGAGTGGGGC
CGCACGGTCG ACGAGCATCT TGGCAAAGTG GTTCGGGAGT CCATCGACTT CTGTCGTGCG
AATGTGGATG TCACCTTCAA CCGCCTCGTC GCCGACGTGC AGCCCGACCG ATCTAGTAAC
CGCAACCCGC TGTTCTCAGC GATGCTTGCC ATGCAGGACA CCTTCACGCC AGAGCCAGAC
GGACCCGTGC TGCGGGTTCT GGAGCCCGGC AACGGCACCG CCAAATTCGA CCTCTGGCTG
GGCGCCACGC CGGTCGACGG CCGCTGGCTG CTCGAAATCG AATACGACCG GCAGCTCATC
GCGCCAGTGG TCGCCGACGG GTTGCTCACC TCGCTGCGTG ATGCCGTCCG CTGGGCGGTC
CGCGACGGTT CGCGCCGGCT CGGTGACCTC TTCGCCGACG CCTCTGGCGC GGCCAGCGTT
CGCTCCGACG GCTGGATCAG CCCGCTGAAC GGCGACACGC CATGGGACTG GGTCTCGGCG
GCGGCTCGGC GGCGGCCCGA CGCCCCTGCG ATCGAAGACC CGAACCGTCA ACTGAACTAC
GGCCAGTTGG TAGCTGAGGC CGAGCGGATC AACGCCGGCC TCGCTGCGCA CGGCGTCAGC
CCTCGAGCCG TGGTGGGCCT CGCCGCGATG ACCCTGTGCG ACACGGTCAC GGCCATCTTG
GCCATCCTGC GCCGTGGCGC GGCGTATCTT CCCCTGGATC CGGGCCTGCC CGCCCAACGG
CTGGAGTACA TGGTCCGGCG GGCCGGCTGC GAATTCATCG TCGGCGAGAC GGTGGTGCCT
GGCGTGCCCA CAGTCACGGT GGCGGACTTG GCCGCCGCGA CGCAGCCGGT GCCCGACTCG
CTGGCCGACC CTACGGCCCC GATCTATGTC ATGTACACGT CGGGCTCCAC CGGGCAGCCC
AAGGGCGTCC AGATGGGGCA CCGACCGCTG GCCAACCTGA CAAGCTGGCA GATAGCAGCC
CTATCCATGG ACGCCGAGAC CCGCTTTCTC CAATACGCCC CGCTCGGCTT CGATGTCTCC
TTCCAAGAGA TCCTGCCGAC TCTGGCCGCC GGCGGGACGG TGGTCTCCCG TGAGCCAGCC
GACCGGCGGA TGTTCACCGC CATGCTCACT CGGATCGCCG CCACCGAGGT GACGCACGTC
TATCTACCGG TCGCGGCGCT GCGGCCCTTG GTGCAGATCG CCGCCGCCAG GGACACTCGA
CTGCCGGCGC TGCGCTACGT TTGCGTCTCG GGCGAACAAC TCACCGTCGA CGACGAGATC
CGCGACTTTT TTCTCGCCCA CCCGCACTGC ACCCTGGTCA ACCTGTACGG CCCTACCGAA
ACCCACGCGG TGACATCGCA CCGGCTGTCG TACCGGGACT CGGTATGGCC GACCCACATG
CCGATCGGTC AGCCGTACCC AGGGGTACGC GCATACGTGG TCGACGTAAC CGGCCACCTC
GCCCCGCCCG GCGTCGCCGG CGAGCTGCTC CTAGGCGGAG ACTGCCCCGC CGACGGATAC
ATCAACGACC CGGACAGCAC GGTCGAGAGG TTTGTGCCCG ACCGCTTTTC GGGCACCCCC
GGTAGAACCA TGTACCGCAC TGGGGACCTC GTAGTACGCG ACGACCGCGG TGACCTGGTC
TTCCTGGGCC GGATGGACAC TCAGGTCAAA ATCCGGGGAT ACCGAATTGA GTTGGGCGAG
ATCGAAACCG TCGCGAACCA AGTCGATGGC GTTCGACAGG CGGTCGCGTT GGTCCGGGGC
AGCGGCGTCG ACCGGGAACT CGGCTTGATC GTTCGTCTCG ACACCGACGC CACTTTCGAC
CCGGAGCAGG TCCGTCAACG GCTGGCAACG GCACTGCCGG TCTATATGCG GCCGCTGTGG
ATATTTGCAG TCGAGGTGGT TCCGACGACA CCGACCGGCA AGACTGACCG GGACGCCCTC
CTGCGGCTCG CCGACGAGCT GCTGGTCGAT CAACAAAGCG CTGACACTGG TGAGGTCACC
TACGCCGACG AACTGGAGCG GGACCTAGCC GGGCTGTGGG GCAGGGTACT CGATGTCGAG
GGCATCCAGC CGGACCGTCC ACTCATCGAG TACGGCGCCC ACTCGCTCAA CATCTTTACC
ACCCTCGCCG AGGTGCAGGA GCACTACGGG GTGGCGGTGC CATTGGTCGA CTTCTTCGCC
ACGCCGACCG TGGCCACCCT TGCCGAACTG ATCCGGGCGG GCGGGGGCGG CGACGCGGCG
GTGACGTCAT GA
|
|---|
| Protein sequence | MTTTAGTKLA TATAPARLPI TESQKGLLVV NERSPGRAVY NQLVRFDIDP SVPDEMIERA
LVTVVAVQPA MRQVFGLLPE MHVRLTPPPG PQDFPLEWVT ARQRDFEEAV GAAQRRIGRP
EFDLANGPAY RFAVVRCLDE PRVAVLMCDH HIILDGVSMG PLVRDLQEAL SGRLAGAEIE
QRRSARETAF VKELAAQNRT ATSDRVVERS REWAARLREV PPLVLAPLPG RAVQTEFTGA
RVGWHLSQDE TAALSETCRR LEISPFVFFS GIYGTVLARH GNVSRVLVGS PFMARRTIGA
FELGGFFVNT LPVTVDVEWG RTVDEHLGKV VRESIDFCRA NVDVTFNRLV ADVQPDRSSN
RNPLFSAMLA MQDTFTPEPD GPVLRVLEPG NGTAKFDLWL GATPVDGRWL LEIEYDRQLI
APVVADGLLT SLRDAVRWAV RDGSRRLGDL FADASGAASV RSDGWISPLN GDTPWDWVSA
AARRRPDAPA IEDPNRQLNY GQLVAEAERI NAGLAAHGVS PRAVVGLAAM TLCDTVTAIL
AILRRGAAYL PLDPGLPAQR LEYMVRRAGC EFIVGETVVP GVPTVTVADL AAATQPVPDS
LADPTAPIYV MYTSGSTGQP KGVQMGHRPL ANLTSWQIAA LSMDAETRFL QYAPLGFDVS
FQEILPTLAA GGTVVSREPA DRRMFTAMLT RIAATEVTHV YLPVAALRPL VQIAAARDTR
LPALRYVCVS GEQLTVDDEI RDFFLAHPHC TLVNLYGPTE THAVTSHRLS YRDSVWPTHM
PIGQPYPGVR AYVVDVTGHL APPGVAGELL LGGDCPADGY INDPDSTVER FVPDRFSGTP
GRTMYRTGDL VVRDDRGDLV FLGRMDTQVK IRGYRIELGE IETVANQVDG VRQAVALVRG
SGVDRELGLI VRLDTDATFD PEQVRQRLAT ALPVYMRPLW IFAVEVVPTT PTGKTDRDAL
LRLADELLVD QQSADTGEVT YADELERDLA GLWGRVLDVE GIQPDRPLIE YGAHSLNIFT
TLAEVQEHYG VAVPLVDFFA TPTVATLAEL IRAGGGGDAA VTS
|
|---|
| |