| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0646 |
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| Symbol | |
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| ID | 5057087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 728026 |
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| End bp | 728853 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640472914 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001157502 |
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| Protein GI | 145593205 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGTG GCGTCGGGGT CGGGGGGCCC GAACTTCGGC GTTGGTTGGC GGGGACGGCC
GCGGTCGTCG CGGGCGGGGC GGTGGTGCAC GCGCTGCCGG TGGTCACCGC CAGCGGAGCG
CTGCGGCGTC GGTGCTGGCC CCGGCTGGCG GGGGTGGGTG CGGCCAGTCG GATCGCGTTG
ACCTTCGACG ACGGGCCGAG CCGTACCTCC ACCACCCGGT TTCTGCGGGC GTTGGAGCGC
GCCGACGTAC GGGCAACGTT CTTTCTGCTC GGCACCCTGC TCGACCGCGA TCCCGGACTC
GGCCGGGAGA TGGCGGCGGC CGGGCATGAG CTCGCGGTGC ACGGATGGGA GCACCGGAAT
CTGCTGTGCC GATCGCCTGC CGCGACCTAC GCCGATATCG CCCGCGCTCG GGACACCGTC
GCGGCGGTCA CCGGAGCCTC GCCGCTGTGG TATCGGCCGC CGTACGGGGT GCTGACGGTG
TCGGCGCTGC TGGCGTGCCG GCGGCTGGGC CTGACCCCCC GCCTCTGGAC CACCTGGGGA
CGCGACTGGG ACGCGACCCG GTCTCCGGCG GTGATCTGGG AGACCATCGT GCAGGATCTC
GACGGTGGCG GCACGCTGTT GCTGCATGAT TCGGATCATG CGGCCAGCCC GGGTGCCTGG
CGAGGTGCCT TGGCCATCCT GCCTCGCCTC GTGAGCTGGG CCCAGGAGCG GGAGCTGACC
ATCGGGACGC TCGGCGCACA CGAGGAGACC GAGGCGGCCC GGGAGCCCGG GGCGTGGCGC
ACACCGGTCC GGGCACGACC GGGGCATGAC GACGTACCGG GTGGGTAA
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| Protein sequence | MAGGVGVGGP ELRRWLAGTA AVVAGGAVVH ALPVVTASGA LRRRCWPRLA GVGAASRIAL
TFDDGPSRTS TTRFLRALER ADVRATFFLL GTLLDRDPGL GREMAAAGHE LAVHGWEHRN
LLCRSPAATY ADIARARDTV AAVTGASPLW YRPPYGVLTV SALLACRRLG LTPRLWTTWG
RDWDATRSPA VIWETIVQDL DGGGTLLLHD SDHAASPGAW RGALAILPRL VSWAQERELT
IGTLGAHEET EAAREPGAWR TPVRARPGHD DVPGG
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