| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0610 |
|---|
| Symbol | |
|---|
| ID | 5057051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 690095 |
|---|
| End bp | 691012 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640472880 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001157468 |
|---|
| Protein GI | 145593171 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTGGCC AGTCCACTTT GAGATGGATC CCTGAGGCCA ACTGTTTGGA ATGTACCAAT
ATTGGACTCT GCGCAGGTGT GGGCCGGTGC CTCAGGGAAC CCACCGATGC AGCACGGGTG
ACGGCGGTGG CAAGGGCCGT CGACTACATG ATCGAGCACC GGGCGCAGCC CATCCAGCTC
GTCGATGTCG CGCGGGCGGC AACCATGAGC CAGTTCCATT TCCATCGGAT ATTCCGAGAG
ATCACCTGCA CCACGCCGGC GCGGTTTCTC ACTGCGCTCA GGATGTGCGA GGCACAGCAC
CTGCTGCTCA ACTCACGGCG GTCGGTGACG GAAATATGCT CTTCTGTCGG CTATTCGAGT
CTCGGCACGT TCATCAGTCA GTTCGGCCGC CTGACCGGCC TGTCCCCGCG CCGCTTCCGC
ACGGTCGTCG AGCGGATCGG CCAAGTGCCG ATTCAGGAAC TGACGGACCT TAGCGGCGCG
ATGGCCGAGC GCGGCCCGAT CGGCGCGGTG ACCTCGGACC GACAGGAGCG GTACTGCGCC
CTGCTCGGAC TGTACCGGAC GGACCGCCCG TGGGAGCGGC CGTCAGCCTT CCAGGTCATC
GAAACCGACC ACGTGGTGCG CATACCGCCG GTCAGCGACG GCGAGTACGA CACCGTCTCG
GTTGGGTACA GCCCGGTCAC GACCGTCGCC GAGGTACTCG GAGCGCCCGT CGGTACCCTC
GGCCGGGTTG GCTTCGGTAC GCGGACGCTA GTCGCCCGGG GCGGCCGATC CCGCCATCCT
TTCCACGTCG CCCTGCGCCG CCAGCGCCGC ATCGACCCAC CGGTGGAGTT TTCACGCCCC
CTGCTCTGCC TGGTGACTCG CGCGAACCAG CGTGATGCAG CCCCGGCTCT GCCCACGGAC
GCAGCGGATC GCGGGTAG
|
|---|
| Protein sequence | MRGQSTLRWI PEANCLECTN IGLCAGVGRC LREPTDAARV TAVARAVDYM IEHRAQPIQL
VDVARAATMS QFHFHRIFRE ITCTTPARFL TALRMCEAQH LLLNSRRSVT EICSSVGYSS
LGTFISQFGR LTGLSPRRFR TVVERIGQVP IQELTDLSGA MAERGPIGAV TSDRQERYCA
LLGLYRTDRP WERPSAFQVI ETDHVVRIPP VSDGEYDTVS VGYSPVTTVA EVLGAPVGTL
GRVGFGTRTL VARGGRSRHP FHVALRRQRR IDPPVEFSRP LLCLVTRANQ RDAAPALPTD
AADRG
|
|---|
| |