Gene Strop_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0510 
Symbol 
ID5056949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp587003 
End bp588424 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content67% 
IMG OID640472782 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001157372 
Protein GI145593075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGGC TCACTGTTGC GGCAACATCC GTTGTGATGG ATGGAAACTG GCTACCGGAT 
CCAGTTCAAC CGGCCGTGCA GATGGTCTTT GGCCTTGCCT TACGGCAGCT ACGCACGGAG
GCGGGTCTGT CTCTGCGGGC GCTCGGCAAG GCCGCTCACT ACGACTACAC ACGTCTATCC
CGGGCAGAGC GCGGCGAGCA CCTCGTTGAC CCGGATGTCG CCAGGGCGCT CGATCGTGCC
TTGCAGACCG GCGGGCTACT CGGCCGTCTC CGCTCTCTAG AGCCACCCGT TGCCCCCGCT
CGGGGGCGGG CGCCAGCGCT ACCACGGACT ACCTTCGGCG ATGGCCCCGG GGATACGGTG
AAACTGGAGC TACGGACGGC CGATGGAAGG ACCGTGCAGG TGAGCCTGAC ACGACGGGAG
TTCGCGCAGT TGCTGGGCAG TGGCGCGCTC CACGCCGTAC TGCCGGCGGG GGTGACCGAC
CTCGACCAAG CCGACCGACT AAGCCACAGC CTCAGTGGGT CACGAGTTGA CCCGGAAGTT
CTCGGCTACT TCCAGCGGCT CCTGACCGAG CACTACACCG CAGACAAGAT GCTCGGGCCC
CGGCAACTTC TCGGGCCCGT GATGGCACAG CTTGACGTTC TCGACACGCT ACGCCGGACC
GTGAGACTTG GTGACACGCA GCCCGTGCTG CAACTACTGA CGCAGTACGC CGAGTTCGCC
GGGTGGCTCC ACCAGGACGG CGGTGATCTG CGCGCCGCCA TGCACTGGTC TGACCGGGCA
TCCCAGTGGG CGCAGGCAGC GGGCGACGAC GAAATGGTGG CCTACATGCT CGTACGGAAG
AGCAACATCG CCACCCTTGA CAACGACCCG CGCGCCGTTG TTGCCCTAGC CGCCGCTGCT
CGCCAAGTTC GGGGGGACGT AAGCCCAAAG CTCCTGGCGT TGGCCAGCCA GCAAGAGGCG
CGCGGCTGGG CGCAACTCCA CAACGTTCAG CGCTTCCGGG CGTGCCTCGA CAGGGCGTCG
GACCTCCTCG CAACCCACCC GGCTGGGCTG CGCCCCAGTT CGCCGGTCTA CCTCCACGGG
TACGACCTGG ACGCACTGGA AGAACAGAGC GCTAGCGCTT ACCGCAGCGC CGGCCACACC
GCAACCGCTG CGGCGATTCT CGAACGGAAG ATTCGCCAGA CGCCAAACCA CCTCGCGCGG
GATCAAGCCC ACCAGCGGGC GAAGCTGGCC AACCTTGTCA CCGCCGGCCC TGATCCGGAT
CCGGAGCGGG CCGCTGAACT GGGCATCGCC TGCCTGGATG CATGGCGCCA GACGGGCTCG
GCACGGATCG CTGGTGAGCT GCATGAATTG AAACGAACGC TGGCCCGCAG GTGGCCGGAT
CTACCCGCCG CGCGCCCACT TCACGACGCC CTAATGGCCT GA
 
Protein sequence
MNGLTVAATS VVMDGNWLPD PVQPAVQMVF GLALRQLRTE AGLSLRALGK AAHYDYTRLS 
RAERGEHLVD PDVARALDRA LQTGGLLGRL RSLEPPVAPA RGRAPALPRT TFGDGPGDTV
KLELRTADGR TVQVSLTRRE FAQLLGSGAL HAVLPAGVTD LDQADRLSHS LSGSRVDPEV
LGYFQRLLTE HYTADKMLGP RQLLGPVMAQ LDVLDTLRRT VRLGDTQPVL QLLTQYAEFA
GWLHQDGGDL RAAMHWSDRA SQWAQAAGDD EMVAYMLVRK SNIATLDNDP RAVVALAAAA
RQVRGDVSPK LLALASQQEA RGWAQLHNVQ RFRACLDRAS DLLATHPAGL RPSSPVYLHG
YDLDALEEQS ASAYRSAGHT ATAAAILERK IRQTPNHLAR DQAHQRAKLA NLVTAGPDPD
PERAAELGIA CLDAWRQTGS ARIAGELHEL KRTLARRWPD LPAARPLHDA LMA