Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0510 |
Symbol | |
ID | 5056949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 587003 |
End bp | 588424 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640472782 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001157372 |
Protein GI | 145593075 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGGGC TCACTGTTGC GGCAACATCC GTTGTGATGG ATGGAAACTG GCTACCGGAT CCAGTTCAAC CGGCCGTGCA GATGGTCTTT GGCCTTGCCT TACGGCAGCT ACGCACGGAG GCGGGTCTGT CTCTGCGGGC GCTCGGCAAG GCCGCTCACT ACGACTACAC ACGTCTATCC CGGGCAGAGC GCGGCGAGCA CCTCGTTGAC CCGGATGTCG CCAGGGCGCT CGATCGTGCC TTGCAGACCG GCGGGCTACT CGGCCGTCTC CGCTCTCTAG AGCCACCCGT TGCCCCCGCT CGGGGGCGGG CGCCAGCGCT ACCACGGACT ACCTTCGGCG ATGGCCCCGG GGATACGGTG AAACTGGAGC TACGGACGGC CGATGGAAGG ACCGTGCAGG TGAGCCTGAC ACGACGGGAG TTCGCGCAGT TGCTGGGCAG TGGCGCGCTC CACGCCGTAC TGCCGGCGGG GGTGACCGAC CTCGACCAAG CCGACCGACT AAGCCACAGC CTCAGTGGGT CACGAGTTGA CCCGGAAGTT CTCGGCTACT TCCAGCGGCT CCTGACCGAG CACTACACCG CAGACAAGAT GCTCGGGCCC CGGCAACTTC TCGGGCCCGT GATGGCACAG CTTGACGTTC TCGACACGCT ACGCCGGACC GTGAGACTTG GTGACACGCA GCCCGTGCTG CAACTACTGA CGCAGTACGC CGAGTTCGCC GGGTGGCTCC ACCAGGACGG CGGTGATCTG CGCGCCGCCA TGCACTGGTC TGACCGGGCA TCCCAGTGGG CGCAGGCAGC GGGCGACGAC GAAATGGTGG CCTACATGCT CGTACGGAAG AGCAACATCG CCACCCTTGA CAACGACCCG CGCGCCGTTG TTGCCCTAGC CGCCGCTGCT CGCCAAGTTC GGGGGGACGT AAGCCCAAAG CTCCTGGCGT TGGCCAGCCA GCAAGAGGCG CGCGGCTGGG CGCAACTCCA CAACGTTCAG CGCTTCCGGG CGTGCCTCGA CAGGGCGTCG GACCTCCTCG CAACCCACCC GGCTGGGCTG CGCCCCAGTT CGCCGGTCTA CCTCCACGGG TACGACCTGG ACGCACTGGA AGAACAGAGC GCTAGCGCTT ACCGCAGCGC CGGCCACACC GCAACCGCTG CGGCGATTCT CGAACGGAAG ATTCGCCAGA CGCCAAACCA CCTCGCGCGG GATCAAGCCC ACCAGCGGGC GAAGCTGGCC AACCTTGTCA CCGCCGGCCC TGATCCGGAT CCGGAGCGGG CCGCTGAACT GGGCATCGCC TGCCTGGATG CATGGCGCCA GACGGGCTCG GCACGGATCG CTGGTGAGCT GCATGAATTG AAACGAACGC TGGCCCGCAG GTGGCCGGAT CTACCCGCCG CGCGCCCACT TCACGACGCC CTAATGGCCT GA
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Protein sequence | MNGLTVAATS VVMDGNWLPD PVQPAVQMVF GLALRQLRTE AGLSLRALGK AAHYDYTRLS RAERGEHLVD PDVARALDRA LQTGGLLGRL RSLEPPVAPA RGRAPALPRT TFGDGPGDTV KLELRTADGR TVQVSLTRRE FAQLLGSGAL HAVLPAGVTD LDQADRLSHS LSGSRVDPEV LGYFQRLLTE HYTADKMLGP RQLLGPVMAQ LDVLDTLRRT VRLGDTQPVL QLLTQYAEFA GWLHQDGGDL RAAMHWSDRA SQWAQAAGDD EMVAYMLVRK SNIATLDNDP RAVVALAAAA RQVRGDVSPK LLALASQQEA RGWAQLHNVQ RFRACLDRAS DLLATHPAGL RPSSPVYLHG YDLDALEEQS ASAYRSAGHT ATAAAILERK IRQTPNHLAR DQAHQRAKLA NLVTAGPDPD PERAAELGIA CLDAWRQTGS ARIAGELHEL KRTLARRWPD LPAARPLHDA LMA
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