| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0502 |
|---|
| Symbol | |
|---|
| ID | 5056941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 581319 |
|---|
| End bp | 582395 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472775 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001157365 |
|---|
| Protein GI | 145593068 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAA GTTCCGTACT GGCCGACATT CCGGCCGCTG TCGCACGCGC CGCCGAGACG
GACGGCTTCT CCGGCGTGGT CCTGATCCGC CGCGGCGAGG ACACCCTGCA CTCCTGCGTG
ACCGGGTTGG CGCAGCGGGC CTGGCAGGTG CCCCACACCC TCGATACCCG TTTCCGGGTG
GCGTCGGTGT CGAAGATGTT CACCGCGGTC GGGGTCCTGC AACTCGTCGA GCGGGGCCTG
CTCGACCTCG ACGCACCCAT CGTCGAGCTG CTCGACCTGG CCGAAACCAC GATCTCGGCG
CAGGTGACGG TGCGGCAGCT GTTGACCATG ACCGGAGGTA TCGCCGACTG GTTCGACGAG
ACCGGCGACT GGGAGGCCAC CTGGGCCGAA CTGCTCCGCA CGCACCCGGT GTATCTGCTG
CGTCGTAACG CCGATTACCT GCCGCTGTTC GCCGACAAAC CGGCCCGCTT CCCTCCAGGT
GAGCGGCACG AGTACAACGG CGCCAGCTAC ATCCTGCTCG GCATGCTCAT CGAGCAGCTC
ACCATGGCGC CGTTCGCCGA GCACCTGCGC GAGCACGTCT TCGGCCCCGC CGCCATGACC
GACACCGACC TCCTGCCTCT GGAAGCCGAC GCACCGCGGG TCGCCGACGG CTATGTCCCC
GCCCGCGACG GCACCGGCGC GATCACCGGC TGGACCCGCA ACATCTACGC CACCACCCCA
GAGCCGGCCG CCGACGGCGG CGCCACCGCC ACCGCCGCCG ACCTGATCGC CTTCACCCAG
GCCCTACGCG CCGGCGCCCT GCTACCGGAT CAGGCCGTGG CCGAGATGCT CGCCCCCCGA
GTCGCCGAGC GCGAGGAGAA GGTCCGCGGC TACCTCTGGC GCTACGGCTA CGGCGTCATG
TCGATCCTCG ACGACGACGG CACCGTCATC CGGTGGGGCC ACACCGGCGA GGAAGACGGC
GTCAGCACCC GCCTATACCA CTACCCGAGC CTCAACATCG ACGTCGCCAT CTGCGCGAAC
ACCTCCTGGT CCGCCGGGAA GCTCGCCTGG AACATCCACG ACCTGCTCCT GCCGTAA
|
|---|
| Protein sequence | MPESSVLADI PAAVARAAET DGFSGVVLIR RGEDTLHSCV TGLAQRAWQV PHTLDTRFRV
ASVSKMFTAV GVLQLVERGL LDLDAPIVEL LDLAETTISA QVTVRQLLTM TGGIADWFDE
TGDWEATWAE LLRTHPVYLL RRNADYLPLF ADKPARFPPG ERHEYNGASY ILLGMLIEQL
TMAPFAEHLR EHVFGPAAMT DTDLLPLEAD APRVADGYVP ARDGTGAITG WTRNIYATTP
EPAADGGATA TAADLIAFTQ ALRAGALLPD QAVAEMLAPR VAEREEKVRG YLWRYGYGVM
SILDDDGTVI RWGHTGEEDG VSTRLYHYPS LNIDVAICAN TSWSAGKLAW NIHDLLLP
|
|---|
| |