Gene Strop_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0437 
Symbol 
ID5056876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp499373 
End bp500107 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID640472710 
Productbeta-phosphoglucomutase family hydrolase 
Protein accessionYP_001157300 
Protein GI145593003 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCT GCCTGTTCGA CCTGGACGGG GTCCTCACCC AGACCGCTCG CGTCCACAAC 
GCCGCGTGGC GTGCGACGTT CGACGAGTTC CTGCGTCGTC ACGCCGCCGA CGCCGATGTG
CCGTTCCAAC CGTTCGACCC GGATGAGGAC TACCGTCGGT ATGTCGACGG CCGGCCCCGG
TACGACGGGG TCCGCACCTT CCTCGCCTCG CGCGACATCG TGCTTCCGGA GGGAACACCG
GACGACCCGC CCGAGGCGGA CACGGTCCAC GGCATCGGCA ACTGCAAGAA CGTCCGGCTG
CTCCAGGAGC TGCGGACGCA TGGGGTGGAT GTCTACCCTG GCTCGGTGAC GTACCTCAAG
GCGGCGACCG ACGCCGGGCT GCGTCGTGCG GTCGTCACCG CCAGCGCCAA CGGCCGTGAG
GTGGTCGCCG CAGCAGGGCT GGAGGCGCTG CTGGAGACCC GGGTTGATGG TCTCGTCGCC
CGAGCCGAGA AGCTACGCGG CAAACCAGAA CCGGACACCT TCCTGGCCGG GGCCGAACGG
CTCGGGGTGG CTCCGGGCAA CGCGGCCGTC TTCGAGGACG CCCTCGCCGG AGTCGCCGCC
GGCCGAGCCG GTGACTTCGG GTACGTGGTG GGCGTGGACC GGGCCGGGCA GGCCGATGCC
CTGTTGGCGC ACGGCGCAGA CATTGTCGTA CAGGATCTCG CGGAGCTGAT CGAGAAGCGG
GAGCCGGACG CATGA
 
Protein sequence
MTACLFDLDG VLTQTARVHN AAWRATFDEF LRRHAADADV PFQPFDPDED YRRYVDGRPR 
YDGVRTFLAS RDIVLPEGTP DDPPEADTVH GIGNCKNVRL LQELRTHGVD VYPGSVTYLK
AATDAGLRRA VVTASANGRE VVAAAGLEAL LETRVDGLVA RAEKLRGKPE PDTFLAGAER
LGVAPGNAAV FEDALAGVAA GRAGDFGYVV GVDRAGQADA LLAHGADIVV QDLAELIEKR
EPDA