| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0433 |
|---|
| Symbol | |
|---|
| ID | 5056872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 493109 |
|---|
| End bp | 495061 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640472706 |
|---|
| Product | CDP-alcohol phosphatidyltransferase |
|---|
| Protein accession | YP_001157296 |
|---|
| Protein GI | 145592999 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGACCA CGGACGGGTC AGCGGGCATC GCCGACCGGC TGGCCGGACA GTGTCGCCAC
GCGGGGATCG ACGAGGTGCG GCTGGTCGGT GACCTGGCCA CGTTGGCGGA CCTGGCGGAG
TCGGCTTCCG GTCCGGTCCT CGTCACCGGT GCTGATCTGG TCGCGCACAC GGCCGTCCTG
CGGCACCTCG CCACCAGTCC GGCTGAGCCG ACGGTGGCGC TGGTGCTCGC CGGTCCGCCG
GTGCCCGGTC GGACAGTGGT TCGGGAGGAC CGGGGGCAGG TGGTCGCCGC TGGCTCGCCG
GAGGCACTGG ACGGCGAGGC CACCGGTGCG TTCGGTGGTG CGCTGCGGGT CGATCCGGCC
AACCTGCCGG CCCTGGCTGC CGCTGCGCGC GCGATCGCCG CCGAGGTGGT GCCGGTGGGA
GCCGCCGCGG CCCACGATGT TGTGGACGAC GAGCCCGCCG TCGACCGGCT CTTCGCCGAC
CTGGTGGCCC GCGACGCGGT GACCTTCGCC CATCGGGTAC GGCTGCTCGT CGCGCGCCGG
GTCGCCGCCG ACGACGACCG GGCCGCCGCC GAGTCAGCCG TCGCCGCGGT CGACGCGGAC
CAGGCCGAGT TGCGGCTGTC GGTGAAGGAG CGAGATGACT TCTTCACCAC ATTCTTTGTC
AGTACCTGGT CGCCGTCCGT GACGAAGGTG GCGGCCCGAC TCCGGCTGAG CCCCACCACG
GTCACGATGA TCTCGGTGGC GTTCGCGGTG GCGGCCGCAT TGTTGTTCGG CGCTGGGGGA
CGGCCCGCGT TGGTCGCCGG TGCGGTGCTG CTCTACCTGG GTTTCGTGCT GGACTGCGTG
GATGGGCAGC TCGCCCGCTA CACCCGTACG TTCAGCGCCT GGGGTGGGTG GCTCGACACC
ATGGCCGACC GGGCCAAGGA GTTCATCGTC TACGCCGGCC TTGGCTACGG CGCCACACAG
GCCGGATTCC GCTACGGGTG GGCCCTGGCG ATCGCCGCGA TGGCCGTGCA GACCGTCCGG
CACATGAGCG ACACCTGGTA CGGCGCGATG CACGACGAGG CGGCCCGTCG GCCGCGGGTG
ACGCCGGGAG GTGGGTTTGG TGACCGGCTC AGTGCCGCCT CGAATCGGGT GCAGGCCGAC
GTCGGCTCGG TGACCTACTG GCTGAAGCGG ACGGTGGTCT TTCCGATCGG CGAGCGATGG
GCGTTGGTCG CCCTGGCGGC AGCGTTGTTC GACCAGCGGG TCGCCCTGTT CGCGGTGCTG
ACCGGGATGG TGCTGGCGCT CGGGTACACC GCGGCGCTGC GGCTGCTGCG GGCCCGCTCG
ATGCGGGTCG GAGTATTGAA CACAGTGGAT GCCAGCCTGC ATCGCGACGA CGGGCCGCTG
GCCCGCGCCC TGCCGACGTT GCGCTGGCCG GGCCCGCTGG GGCTGGCGGT GTCGGCGGTG
CTGGTGGCGG CGGTGCTGCT CGCGTTCGCG CTGCTCGCCG AGGACTCCCT CCCGCAGTGG
ACGGCGTTGG TCGCGCTCGG TGGGCTGCTG CTGGCTGCCG TGGGGGCTCG GGCCGCCCAC
GGTGGGGCGT TGGACTGGCT GGTGCCGGCG GCACTTCGCG CGGCGGAGTA TCTCTTTGCG
ATCGCGGTCG GCGTGCTCGG GGGTGTCCCA GCCTGGCTGG TCTTCGGGTA CGTCTTCGTG
CTGACGCTGC ACCACTACGA CCTGACCGCG CGGCTGGAGA AGCGGAAGCT GGCCCCGCCG
TTGCACGATG CCACGCTGGG CTGGGAAGGG CGGTCGGCGG TACTGACGCT CTCAGCGATC
ACCGGAATTG CTGCTATTGG CATGGCTACA CTCGGTATAT ACCTTTTAGT GGTCTTCGTG
GGGAGCGTGG CCCTCGCCTG GGTGATCCGG CCCGCCCGCG CGGCACGGGC GGCGGGATCA
GTAGGTGGTG TTGGCGGTCG CCCACCGGGT TAG
|
|---|
| Protein sequence | MLTTDGSAGI ADRLAGQCRH AGIDEVRLVG DLATLADLAE SASGPVLVTG ADLVAHTAVL
RHLATSPAEP TVALVLAGPP VPGRTVVRED RGQVVAAGSP EALDGEATGA FGGALRVDPA
NLPALAAAAR AIAAEVVPVG AAAAHDVVDD EPAVDRLFAD LVARDAVTFA HRVRLLVARR
VAADDDRAAA ESAVAAVDAD QAELRLSVKE RDDFFTTFFV STWSPSVTKV AARLRLSPTT
VTMISVAFAV AAALLFGAGG RPALVAGAVL LYLGFVLDCV DGQLARYTRT FSAWGGWLDT
MADRAKEFIV YAGLGYGATQ AGFRYGWALA IAAMAVQTVR HMSDTWYGAM HDEAARRPRV
TPGGGFGDRL SAASNRVQAD VGSVTYWLKR TVVFPIGERW ALVALAAALF DQRVALFAVL
TGMVLALGYT AALRLLRARS MRVGVLNTVD ASLHRDDGPL ARALPTLRWP GPLGLAVSAV
LVAAVLLAFA LLAEDSLPQW TALVALGGLL LAAVGARAAH GGALDWLVPA ALRAAEYLFA
IAVGVLGGVP AWLVFGYVFV LTLHHYDLTA RLEKRKLAPP LHDATLGWEG RSAVLTLSAI
TGIAAIGMAT LGIYLLVVFV GSVALAWVIR PARAARAAGS VGGVGGRPPG
|
|---|
| |