| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0412 |
|---|
| Symbol | |
|---|
| ID | 5056851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 472643 |
|---|
| End bp | 473293 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 640472685 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157275 |
|---|
| Protein GI | 145592978 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR03664] futalosine nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.302438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAG TCCTGGTCGT CACCGCGGTT CCCGCCGAGG CCGAGGCGAT CCGTGCGGGC
CGGGGCCCGA CGGTCACGGT TGCGCCGGTC GGGGTCGGTC CGGCGGTGGC TGGGGCCGCC
ACCGCCCGGC TGCTGGCCCT GGCGGAGGCC GCCGGCCGCC CGTACCGACT GGTCGTCAGC
GCGGGTGTGG CAGGCGGCTT CACGGGACGG GTGAAAGTCG GCGGAACGGT CGTCGGCACC
AGTGCGGTCG CGGCCGACCT GGGCGCCGAC TCCCCGACGG GCTTCATCCC CGTGGACCAG
CTCGGGATGC CGGCGGAGTT GCTGGGCGGC GGCCCCACCA TCACCGCGGA TCCGACCCTG
GTCGCCGCGC TCCGGGCCGC GCTTCCGGCC GCCGCGGCGG GTCCGGTGCT GACCGTCGGC
ACGGTCACCG GAACGGTCGC CGGGACCGAC GCGCTCCTCC GCCGGCACCC CGACGCGGTG
GCCGAGGCCA TGGAGGGCTA CGGGGTGGCC GTCGCCGCCG CGCACGCCGG CCTGCCCTTC
GTCGAGTTAC GCACCATCTC CAACCCGGTC GGGCCACGCG ACCGCAACGC CTGGCGCCTC
CGGGAGGCGC TCACCGCCCT CACCGAGGCC GCCGCGGCCC TCCCGTTCTG A
|
|---|
| Protein sequence | MTGVLVVTAV PAEAEAIRAG RGPTVTVAPV GVGPAVAGAA TARLLALAEA AGRPYRLVVS
AGVAGGFTGR VKVGGTVVGT SAVAADLGAD SPTGFIPVDQ LGMPAELLGG GPTITADPTL
VAALRAALPA AAAGPVLTVG TVTGTVAGTD ALLRRHPDAV AEAMEGYGVA VAAAHAGLPF
VELRTISNPV GPRDRNAWRL REALTALTEA AAALPF
|
|---|
| |