| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0368 |
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| Symbol | |
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| ID | 5056806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 423138 |
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| End bp | 423716 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640472640 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001157231 |
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| Protein GI | 145592934 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.810172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACGCGG CGCGGTCCGC ACCGGGACCG TTGCGGCATC CGAACCGTTA TGGGGCGGAC
AAAGGGCCGG GTCGTCACCC AAGGCTCTCG ACTACCGCAG CGGCGACAAC GAGCGGGCAC
TGGGAGGGCG ACCTCATCAT CGGCAAGGCC CACACGTCAG CGATCGGCAC GCTCGTCGAA
CGCACCACCC GCTTCGTCGC TTTGGTCCAC CTGCCCAACG GCCGCCAGCC CGCCCAGGTC
CGTGACGCTC TCGTCCAGAC TGTCTCGAGC CTGCCGGCCC AGCTCAAAAG CTCCCTGACC
TGGGATCAGG GATCCGAAGT GGCCCTGCAC ACACAGTTTA GCACCGCCAC CGACATGCCC
GTCTTCTTCT GCGATCCCGG CAAGCCCTGG CAGCGCGGGT CGAACGAGAA CACCAACGGT
CTGCTACGCC AGTACCTCCC CAAGGGCACC GACCTGACCC GCTACAGCCG CGGGGACCTG
GACGCCGTGG CCGCCGAGCT AAACAGCCGA TCACGCAAAA CGCTCGGCTG GGACACCCCA
GCCGAACGCC TCGCTAAATT CCTGGCAACA GCCAATTGA
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| Protein sequence | MHAARSAPGP LRHPNRYGAD KGPGRHPRLS TTAAATTSGH WEGDLIIGKA HTSAIGTLVE
RTTRFVALVH LPNGRQPAQV RDALVQTVSS LPAQLKSSLT WDQGSEVALH TQFSTATDMP
VFFCDPGKPW QRGSNENTNG LLRQYLPKGT DLTRYSRGDL DAVAAELNSR SRKTLGWDTP
AERLAKFLAT AN
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