Gene Strop_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0366 
Symbol 
ID5056804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp422088 
End bp422450 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content71% 
IMG OID640472638 
Producthypothetical protein 
Protein accessionYP_001157229 
Protein GI145592932 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.210731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC TGGCCGAGTA TCGACGGGCG ACCCGGTGCT TCGAAGCCGG GGATCCGTCC 
GAAGCGGCGC GGCTGCTGGA GCCCATCCTC GCGGCCGAGC CCGGCAACAC CGCCGTGCGC
CAACTGCTGG CCCGGTCGTA CTTCTCCTCA GCGCAGCTCA GCCGCGCCGA GGAGCAGCTA
CGCGAGTTGG TTGATCGGGA CCCGAGTGAC CACTACGCCC ACCACGTGTT GGGCCGGACG
CTGGAGCGGC TGAATCGGCC GGTGGACGCG TTGCGGCATC TGCGCATCGC GGCGGCGATG
CACCACGGCA ACGCCGACTA CCAGGCGGCG TTGCGCCGGG TGCAGGCCCG GGTCGGTCGT
TGA
 
Protein sequence
MDLLAEYRRA TRCFEAGDPS EAARLLEPIL AAEPGNTAVR QLLARSYFSS AQLSRAEEQL 
RELVDRDPSD HYAHHVLGRT LERLNRPVDA LRHLRIAAAM HHGNADYQAA LRRVQARVGR