Gene Strop_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0324 
Symbol 
ID5056762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp375831 
End bp376229 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content71% 
IMG OID640472596 
Productendoribonuclease L-PSP 
Protein accessionYP_001157187 
Protein GI145592890 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC TCCGTCACGT CTCGGCCCTC GCCGAGGCCG AGTACGCGTA CGTCACCACC 
GTCGAGCCAT CAACGCGCCT CGTCTTCACC GCGGGAGCGT GCCCACTCGA CGCGGACGGC
CGTACGGTCG CCCCCGGCGA CCATGCCGCC CAGGCCCGGC AGGTGATGGC CAATCTGGAG
ACCGCGCTCA CCGCGGCGGG CGCCTGCCTC ATCGATGTCG TCAAGACCAC GGTGTACGTG
GCCTCGGCGC ACCAACCCGA CCTGGTGACC GTCTGGCAGG TCGTCCGGGA CACCTTCGGC
GACCACGACC CGCCCAGCAC CCTGCTCGGG GTAGCCACGC TTGGCTACCC CGAGCAGCTC
GTCGAGGTCG AGGCGGTCGC CGCCGTAAGC GCCGCGTGA
 
Protein sequence
MPELRHVSAL AEAEYAYVTT VEPSTRLVFT AGACPLDADG RTVAPGDHAA QARQVMANLE 
TALTAAGACL IDVVKTTVYV ASAHQPDLVT VWQVVRDTFG DHDPPSTLLG VATLGYPEQL
VEVEAVAAVS AA