Gene Strop_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0316 
Symbol 
ID5056754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp368320 
End bp368895 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content70% 
IMG OID640472588 
ProductXRE family transcriptional regulator 
Protein accessionYP_001157179 
Protein GI145592882 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTG GTAAGGACCT TCCCAACATT GGCGGGTTCA TTCGGGACCT GCGACGGAGT 
GCGAAGATTT CCCTCCGGCA GCTGTCCGAG CAGGCGGGAG TCAGCAACCC GTACCTGAGT
CAGATCGAGC GCGGGCTGCG TAAGCCCAGC GCAGAGGTGC TCCAGCAGCT TGCCAGCGCG
TTGCGGGTCT CCACTCCGGC GATGTATCTG CGGGCCGGGC TGTTGGACGA CCGGGAGGGG
CAGGGTGTCC TTGCCGCGAT CGCAGCGGAC TCGGACCTGA CCATGGCGCA GAAGCAGTCG
CTGACCCAGA TCTACGAGAC GTTCCGTCGA GAGAACGCAC GGCTCGCGGA GGCGACCGCC
GCCGCCGACG CGGCATCGGC GACCACCGAG GCCGCGACCG GCACGACCAC CGCAGAGCCG
ACGACCGGCA CGGTCACCAC CGAATCAGTC ACCGGCCTGC CCACGACCGA ACCGGAGCCG
GGCCCAGCCC AGCCCTCCGG GGCCTCCGCC GACCTGGCCA ACATCGCGGT CACCGGACCG
ACGACAACCG GGGGCACGCC GACCGGCGGT GCGTGA
 
Protein sequence
MASGKDLPNI GGFIRDLRRS AKISLRQLSE QAGVSNPYLS QIERGLRKPS AEVLQQLASA 
LRVSTPAMYL RAGLLDDREG QGVLAAIAAD SDLTMAQKQS LTQIYETFRR ENARLAEATA
AADAASATTE AATGTTTAEP TTGTVTTESV TGLPTTEPEP GPAQPSGASA DLANIAVTGP
TTTGGTPTGG A