Gene Strop_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0311 
Symbol 
ID5056749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp363655 
End bp364521 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content75% 
IMG OID640472583 
Productaminotransferase, class IV 
Protein accessionYP_001157174 
Protein GI145592877 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG CACGGATCGC GGTGCTCGGG CGTGGCCGGG TGCCGGTCAC GGAGCCGGTG 
CTACGCGGCG ACGACCTGGG CGTCCTGCAC GGCGACGGAC TCTTCGAAAC GATGCACCTA
CGGGCGGGCC GGCCCTGGCT GCGGGAGGCA CACCTGGAAC GGATGACCCG GGCGGCGCCG
GCTTTGGACC TCACCCTGCC CCCGACCGGC GCTCTGGTCG GGTTGCTCGA CGAGATCTGC
GTCGGCTGGC CCAGCGAGGT CGAGGGGGCG CTGCGGCTGG TCTGCACCCG AGGCGTGGCG
GACGGCGCAG CCCCGACCGC GTACGCCACG CTGGCCCCGG TGCCCCCGTC GGCTCGGGCG
GCGCGCCGGG ACGGAATCAC CGTGGCGACG TTGCCACTGG GCGTACCGGC CCGCGGCCGC
GCCGGCCTGG ACTGGCTGCC CACCGCCAGC AAGACCACGT CGTACGCGGT GCACAACGCC
GCCCGCCGGT GGGCGTCCCG CAGTGGCGTC AACGACGCGC TCTGGACCTC CACCGACGGG
TTCGTCCTGG AGGGGCCGAC CGCCAACGTC CTGTGGCTCA CCGGCGGAGC GCTCCGCACG
GTGCCCGCCG CGGCGGGCAT CCTGCCCGGC ACCACCGTCG CCTGGCTGCT GGCCAACGCC
GAAGAGGTGG GGCTGACCGC ACACGAGCAG CTGGCGACCC CGGCCGAGCT ACACGCAGCG
GACGCTGTCT GGTTCAGCTC GTCGGTCCGA GGCCTGGTCG AGGTTCGCGT CCTCGACGGC
ATCGACCGAC CGCGGTCGGC CTACACCCGG CGGTTGCAGG CCCTGCTCGG CTTCCCCGTC
CCGCCCGACG ACGACCAACC GGACTGA
 
Protein sequence
MTTARIAVLG RGRVPVTEPV LRGDDLGVLH GDGLFETMHL RAGRPWLREA HLERMTRAAP 
ALDLTLPPTG ALVGLLDEIC VGWPSEVEGA LRLVCTRGVA DGAAPTAYAT LAPVPPSARA
ARRDGITVAT LPLGVPARGR AGLDWLPTAS KTTSYAVHNA ARRWASRSGV NDALWTSTDG
FVLEGPTANV LWLTGGALRT VPAAAGILPG TTVAWLLANA EEVGLTAHEQ LATPAELHAA
DAVWFSSSVR GLVEVRVLDG IDRPRSAYTR RLQALLGFPV PPDDDQPD