Gene Strop_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0308 
Symbol 
ID5056746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp361647 
End bp362435 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content67% 
IMG OID640472580 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001157171 
Protein GI145592874 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG AAGATCTTCA GTTCACGGTT CTGGGTTGTG CAACGCCGTA TCCGAGTGTG 
GACAATCCTT GTTCCGGCTA CCTGGTGACG GGTGGGGGCG CCCGGGTGTG GGTGGATGCG
GGCAGTGGGA CGCTGGCTCA GCTGCAACGA CATGTCCGGT TGGACGAACT GGACGCCATC
TGGATCTCGC ACCTGCACGC TGACCACAGC GCCGACCTCC TGACCGCCTA CTACGGGGCG
CTGTACGCCG ATATCCAGCT CGCGGCTCCG ATCCCGCTGT ACGGCCCGCC CGGCATCGCC
GACCGATTGG CGCACTTCCT GACCAACACC GCGACCCGCA GCCCGATCGA ATCTGCCTTC
GCCGTCGAGG AGCTACACGA CGGGCATCGG GTGGAGGTCG GCGCGCTGAC GTTGACCAGC
CAGGCGGTGG CGCACGGTAT CCCCGCTTTC GCTCTGCGTG TCGACAATGC GGGCCGGTCG
TTGGTGTACT CCGGAGACAC GGCCCCCTGT CCTGGCCTGA CGAGTCTGGC CAGGGGTTGC
GATGTGCTGC TGTGTGAGGC CGAGAGCGCG CAGGCTCCGA GCGCGGGGGA ACAGGTTCAC
CACACGCCGG AGGATGCCGG TGACACTGCT CGGTTGGCCG AGGCGAGACG CTTGATCGTC
ACACACATTG GGCGGTTCCT CACCCCGCAG CAGGCAGTGA CGCGTGCCTC GACCCGGTTC
GACGGTCCCA TCGACCACGC CGCCCCCGGT GCCACCCATC CGGTTGACCG AGTCGTCACC
CCCCGATGA
 
Protein sequence
MTSEDLQFTV LGCATPYPSV DNPCSGYLVT GGGARVWVDA GSGTLAQLQR HVRLDELDAI 
WISHLHADHS ADLLTAYYGA LYADIQLAAP IPLYGPPGIA DRLAHFLTNT ATRSPIESAF
AVEELHDGHR VEVGALTLTS QAVAHGIPAF ALRVDNAGRS LVYSGDTAPC PGLTSLARGC
DVLLCEAESA QAPSAGEQVH HTPEDAGDTA RLAEARRLIV THIGRFLTPQ QAVTRASTRF
DGPIDHAAPG ATHPVDRVVT PR