| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0217 |
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| Symbol | |
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| ID | 5056655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 247867 |
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| End bp | 248871 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640472489 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001157080 |
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| Protein GI | 145592783 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.584066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCGGT TTATCGTCAG ACGCCTGCTC CAGCTGATAC CCACGCTGTT CGGGCTTTCG
CTCCTGCTCT TCATCTGGGT TCGTCGCCTG CCGGGTGGCC CCGAGGACGC CATCCTCGGC
GAGCGTGGCA CCCCCGAAAT GCGCGCGGCG ATTCGCCGTA GCATGGGTCT CGACGAGCCG
ATCCTGGTGC AGTACGGCCG CTTCGTGCAG CGGCTCCTTC GCCTGGACCT GGGCACCTCG
TCGTCGACCA AACGTCCGGT GGTCGAAGAG TTCCTGGAGC GTTTCCCCGG CACCGTGGAG
TTGACGATCA CCGCCCTGGT GATCGCGATC GGCGTCGGCA TTCCCCTCGG CTACCTGGCC
GCCCGCCGTC GGGGCCGGCT ACTCGACCAT CTCTCGGTCG GCGGATCGCT GGTCGGGATC
TGCGTCCCTA TCTTCTTCCT GGCCTACGTC CTGAAGGCGA TCTTCTCGGA GAACCTGGGC
TGGTTCCCGT CCAGCGGCCG GCAGGATCCG ACCCTCGACG CGACCCGGGT CACGAACTTC
TTCGTCCTCG ACGGGCTGAT GACCCGGGAG TGGGATGCCG CGATGGACGC GCTTTGGCAT
CTGGTGCTGC CGGGGCTCGC GCTGGCCAGC ATCCCGCTGG CGATCATCGT TCGGATCACC
CGGGCGAGCG TGTTGGAGGT GCTCAACGAG GACTTCGTGC GGACCGCCGA GGCGAAGGGG
CTGACCGAGC GGACCGTGCG GGGACGGCAT GTGCTGCGCA ACTCGCTGCT GCCGGTGGTC
ACCTCGATCG GCCTGCTCAC CGGGGGGCTT CTCTCGGGCG CAGTGCTGAC CGAGACGGTC
TTTGCCTTCT CCGGCATCGG GGCCTTCATC TACGAGGCGA TCGGCCAGCG TGACTACCCG
GTGCTGCTCG GTTTCATCAT GATCATTTCG GTGGTGTACG TGCTGGTGAA CCTCCTGGTT
GACCTCTCCT ACAGCCTGAT CGACCCGAGG GTGAGGGTCC GATGA
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| Protein sequence | MFRFIVRRLL QLIPTLFGLS LLLFIWVRRL PGGPEDAILG ERGTPEMRAA IRRSMGLDEP
ILVQYGRFVQ RLLRLDLGTS SSTKRPVVEE FLERFPGTVE LTITALVIAI GVGIPLGYLA
ARRRGRLLDH LSVGGSLVGI CVPIFFLAYV LKAIFSENLG WFPSSGRQDP TLDATRVTNF
FVLDGLMTRE WDAAMDALWH LVLPGLALAS IPLAIIVRIT RASVLEVLNE DFVRTAEAKG
LTERTVRGRH VLRNSLLPVV TSIGLLTGGL LSGAVLTETV FAFSGIGAFI YEAIGQRDYP
VLLGFIMIIS VVYVLVNLLV DLSYSLIDPR VRVR
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