Gene Strop_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0104 
Symbol 
ID5056537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp109619 
End bp111118 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content62% 
IMG OID640472371 
ProductEco57I restriction endonuclease 
Protein accessionYP_001156967 
Protein GI145592670 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG ACCTCCTGAC CCGGGCTGAG CAAAACCGGG CCACAGCCCT GGCGGGCCTC 
GACCCGAAGT CCCAGGACTC CCTAGGGCAG TTCTTCACAC CTGCGCGGGC TGCGGTTCTC
CTCGCCTCGA TGCCACAGCT CCCTGATGCG GGTCAGATTC GAGTCCTCGA TCCTGGCGCT
GGCTCCGGGA TGCTTTCCGC CGCGTTGGTG GCTCGGGTGC TCAACGATCG GTCCAACCTC
GCGGTACACG TGGTGGCAGT AGAGCGTGAC GAGACCCTTC TACCGCAGTT GCGGGACACT
CTCGATGCCT GCGCGACGGC AGGATCCGGC CGTGTGACCT ACGAGTTGGT CACTGATGAC
TTCATCACCG CCTCAACCGG GACACGCCCG GACGAGCGGC TCGGTGGTTT CGACCTGGTC
ATCCAGAACC CTCCATACGG GAAGCTGGCG GCCTCAGCGC CGGCCCGCGC CGCAGTACGC
GAGACTCAGG TGGACGCGCC GAACCTGTAC GCCGCGTTCC TGGCGCTCGG GGCGGCGGCA
CTGAGACCGA ATGGTCAGTT GGTCGCCATT ACCCCGCGCT CGTTCTGCAA CGGGCCGTAC
TTCGGTGCCT TTCGGGCCTA CCTGTTGCGC CAGATTTCGC TCGATCGAGT GCATATATTC
GAATCACGCT CCACCGTTTT CGCCGACACT GGGGTGTTGC AGGAGAACGT GATTTTTTCC
GGCACCAGGG GAGGCGGCCG TGACACGGTG CTGCTCTCCG CGAGTAACGG ACACGAGGAT
AAATCAACTG AGCGTAGGGT GCGGTACAGC GAAGTTGTTC ATGCCTCCGA CCCGCACCAG
TTCATCCGGA TTGCTTCCAA GGATGAGGAC ACGGAGGTGG CTGAGCGTAT GCTGTCGCTG
CCGGACACCC TGGCCTCGCT TGGAATCACC GCGTCCACGG GTCGTGTGGT CGACTTCCGC
TCGCGGGACA GCCTGCTGTA CCAGGCTGTC ACCGAAGCCG CACCGTTGGT ATACCCGGGC
AACCTGCGGC AGGGGCTGGT GACCTGGCCA AGGGAGCTCC GGAAGCCGCA GTGGTTCCGA
CCGGCCTCCG AGAGAGATGC GAAGCTCCTC CTCCCGGAGG GCTGGTACTG CGTCATCAAG
CGGTTCTCCG CCAAAGAGGA GCGTCGCCGT ATTGTTGCCG CGGTCTGGTC TCCGGACCAG
ACTCCTGGCC CTGTTGCCTT CGAAAATCAT CTGAATGTTC TTCACCTGAA CGGAACGGGT
CTCGACCGCG AGATCGCCTT CGGTCTGTCC ATGTGGCTCA ACTCTTCCCT CGTGGAAAAG
TTTTTCCGTT CCTTCTCTGG CCACACCCAG GTTAATGCCA CGGACCTCCG GACCATGCGG
TTCCCGGATG CCGGGTCGCT GCATCATCTG GGACTTGTGT CACCTCATCC ACTGTCTGGG
CAGGAGGAGA TTGACATGAC GGTTGAAAAG GTGATCAGCA AGATTGATGT GGTCGCGTGA
 
Protein sequence
MASDLLTRAE QNRATALAGL DPKSQDSLGQ FFTPARAAVL LASMPQLPDA GQIRVLDPGA 
GSGMLSAALV ARVLNDRSNL AVHVVAVERD ETLLPQLRDT LDACATAGSG RVTYELVTDD
FITASTGTRP DERLGGFDLV IQNPPYGKLA ASAPARAAVR ETQVDAPNLY AAFLALGAAA
LRPNGQLVAI TPRSFCNGPY FGAFRAYLLR QISLDRVHIF ESRSTVFADT GVLQENVIFS
GTRGGGRDTV LLSASNGHED KSTERRVRYS EVVHASDPHQ FIRIASKDED TEVAERMLSL
PDTLASLGIT ASTGRVVDFR SRDSLLYQAV TEAAPLVYPG NLRQGLVTWP RELRKPQWFR
PASERDAKLL LPEGWYCVIK RFSAKEERRR IVAAVWSPDQ TPGPVAFENH LNVLHLNGTG
LDREIAFGLS MWLNSSLVEK FFRSFSGHTQ VNATDLRTMR FPDAGSLHHL GLVSPHPLSG
QEEIDMTVEK VISKIDVVA