| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0048 |
|---|
| Symbol | |
|---|
| ID | 5056480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 56283 |
|---|
| End bp | 58112 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640472314 |
|---|
| Product | protein kinase |
|---|
| Protein accession | YP_001156911 |
|---|
| Protein GI | 145592614 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGC AGGCCCGCCT GCTCGGTGGC CGCTACCAGG TCGGCGAGCT TATCGGCTAC
GGCGGCATGG CCGAGGTGCA TCGCGGTCGT GACCTGCGAC TGGGTCGGGA TGTTGCGATC
AAGATGCTCC GGGCCGATCT GGCCCGGGAC GCCACCTTCC AGATGCGGTT CCGACGGGAG
GCGCAGAACG CCGCCTCCCT CAACCACCCG GCCATCGTCG CCGTCTACGA CACCGGCGAG
GAGCAGGCAC CGACCGGTGA GACCCTGCCG TTCATCGTCA TGGAGTTCGT CGGCGGACGG
ACCCTGAAGG AGGTGCTGGG CGGCGAGGGG CGGTTCCAGC CGCGCCGAGC GCTGGAAATC
TGCGCCGACA TGTGCGCGGC GCTGGAGTTC AGCCACCGGC ACCAAATCAT CCACCGGGAC
ATCAAGCCCG GCAACGTCAT GCTCACCCAG ACCGGCCAGG TCAAGGTGAT GGACTTCGGG
ATCGCCCGGG CGTTGGCCAG CGGTGCGACC ACGATGACGC AGACCAGCGC CGTGATCGGC
ACCGCCCAGT ACCTCTCACC CGAGCAGGCC CGCGGCGAGT CGGTGGACGC CCGCTCGGAT
GTCTACGCCG CCGGCTGTGT GCTCTTCGAG TTGCTCTGCG GGCACCCGCC GTTCGTTGGG
GACAGCCCGG TCAGCGTCGC GTACCAGCAT GTCCGGGAGG CACCACCGAC GCCCAGCGAC
CTCAACCCGG AGGTCCCCCC GGCCGTCGAC GCGATCATCC TCAAGGCACT GTCGAAGAAC
CCGCTCAACC GCTACCAGAG CGCCGGCGAG ATGCGGGCGG ATCTGCTGCG TGCCGCTGCT
GGACGGCCGG TCATGGCGAC CCCGGTCCTG CGGGAGGAGG AGACCACCCA ACTCGCCCCG
GCCGGCGCCG GATACCCGGC CGGTGCGCCC GGTCCGCGTA CCCAACAGAT TCCGGCCCGG
GTTGGCGACC CACGCCGGCG CCGGGCGTCG TCGTGGCTGA TCGCCACCTT CGCCGCGCTC
GGCGTACTCG CGGTGGTCGC GCTGGTGGTC GCCGAGCTCA TGTCCTCGCC ACCCGAAGAG
AAGGCATCGG TCCCGCGGGT GACCGGGCTG ACGGAGGCTG AGGCGATCGA CAAGATCGAG
CAGGCCAACC TGGCGGCGGA AGCCGGCCCG GCGATCCGCG ACAACGACTG CAACAAGGGG
GAGGTGACCA ACCAGGATCC AAGCCCGGGC GAAGAGCTGA ATCCGGCCGA CGTCGTCACG
GTCTTCATCT GTGCGGGGCC GGCGACGGTG ACGATCCCGG ACACCCTGGT CGGTTCCACC
TTCGACAACG CGAAGCGGCA GCTGGAGAAC GCGGGCTTCG AGGTCGATCG GGAGGAGGTC
GACGACGCGG CGCCGAAGAA CACCGTCCTA GGGGTGACGC CGGATGAGGG CAGCCAGGCG
GCGGAGGGGG AGGTGGTCAC GTTGACCGTC TCCAAGGGCA ACATCGGCAC CGTACCGAAC
GTCGTGAACT CCTACGTCGA CGATGCCGAG AGGGAGCTCG AGGACGCCGG CTACGAGGTC
AACATCAAGG AGGGCCAGCC GGTGCCGCCG GGCGAGCAGG GCCGGGTGAC GAACCAGAAC
CCAAGCCCGA ACACCCCGCT GCGGAAGGGC AAGACGGTGA CCATCACCGT GACGGTGCTC
GAGGAGCCGA CCGACTCCCC GACGCCGGAG CCGAGCGAGT CGCCGACGTC GGAGCCGCCC
GACGAGCCGC CGGACAACGG CGGTGAAGGT GGAGGTGGAG GTGGCCTCCC GCTCCCGACC
ACACCTCCGG CCCGTCTCCC GACGCGCTGA
|
|---|
| Protein sequence | MTAQARLLGG RYQVGELIGY GGMAEVHRGR DLRLGRDVAI KMLRADLARD ATFQMRFRRE
AQNAASLNHP AIVAVYDTGE EQAPTGETLP FIVMEFVGGR TLKEVLGGEG RFQPRRALEI
CADMCAALEF SHRHQIIHRD IKPGNVMLTQ TGQVKVMDFG IARALASGAT TMTQTSAVIG
TAQYLSPEQA RGESVDARSD VYAAGCVLFE LLCGHPPFVG DSPVSVAYQH VREAPPTPSD
LNPEVPPAVD AIILKALSKN PLNRYQSAGE MRADLLRAAA GRPVMATPVL REEETTQLAP
AGAGYPAGAP GPRTQQIPAR VGDPRRRRAS SWLIATFAAL GVLAVVALVV AELMSSPPEE
KASVPRVTGL TEAEAIDKIE QANLAAEAGP AIRDNDCNKG EVTNQDPSPG EELNPADVVT
VFICAGPATV TIPDTLVGST FDNAKRQLEN AGFEVDREEV DDAAPKNTVL GVTPDEGSQA
AEGEVVTLTV SKGNIGTVPN VVNSYVDDAE RELEDAGYEV NIKEGQPVPP GEQGRVTNQN
PSPNTPLRKG KTVTITVTVL EEPTDSPTPE PSESPTSEPP DEPPDNGGEG GGGGGLPLPT
TPPARLPTR
|
|---|
| |