Gene Strop_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0030 
Symbol 
ID5056461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp37565 
End bp38266 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content66% 
IMG OID640472295 
ProductMarR family transcriptional regulator 
Protein accessionYP_001156893 
Protein GI145592596 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAGC GATTCCGCTC CGCAGCGCAT TGTGAACCAT TTACGGTAAG AGTGCCCAAC 
GCGGTGGGCC AGAGCCGGTC GCGCACGAAC CCGCCAAACC CTGTTCACGT GCACCTTCCG
CACAATGCTT GCTCGGTAAA CAGCATCCTG AGCAGATACA CTTACAGCAA TATCTCGTTG
ATCAAATACT GGTACGATCT GCGGGTGGAC CAGAGTGTGC TCAACGACCC CCGGATCACC
GCCGTCGGCC TACTCGTCGA GGCGCACGCC GGGCTGTCGG CCCGGTTCAC CGCCCAGTTC
GAACAGCACG GCCTCTCCCC GGTGGAGTTC GAGGTGCTCA CCCGGCTCGT CCGCTCACCT
GACAACCGGC TTCGGATGAC CGACCTAGCC GCACAGACCT CCCTCTCCAC CAGCGGGGTG
ACCCGCGTGG TCGACCGGAT GGAACGCGAC GGCCTCCTCA CCCGGCGCGC CTGCCCCGCC
GACCGACGCA GCTCGTTCGC GGTGGCCACC GACTCCGGCT GCAAGCGGCT CGACGCCGTA
CTCCCAGGTC ACCTACGAAT CATTGAAGAG TGGTTCACCG GGCAGCTCGA CCCGGAGTCA
CTGGCCCGAC TCCTCGATGG GCTACGTCGG GTGCGAGACG CGGTCCACCC CGGCGCTACT
GCCGGCGCCA CCGACCCAGA ACCAGCCCCG GACAGCCGCT GA
 
Protein sequence
MTERFRSAAH CEPFTVRVPN AVGQSRSRTN PPNPVHVHLP HNACSVNSIL SRYTYSNISL 
IKYWYDLRVD QSVLNDPRIT AVGLLVEAHA GLSARFTAQF EQHGLSPVEF EVLTRLVRSP
DNRLRMTDLA AQTSLSTSGV TRVVDRMERD GLLTRRACPA DRRSSFAVAT DSGCKRLDAV
LPGHLRIIEE WFTGQLDPES LARLLDGLRR VRDAVHPGAT AGATDPEPAP DSR