Gene Pnuc_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2060 
Symbol 
ID5053466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2127255 
End bp2128361 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content44% 
IMG OID640472234 
Productpatatin 
Protein accessionYP_001156835 
Protein GI145590238 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAT CTTCGCGCCG TAATTTCTTA AAAACATCAG CTATTAGTTC TGTGGCTATT 
GCTGGGAGCT CTGAGCTTGT TATTGGTTAT GCTCAAGCAC AGACAAAAAC TTCAAAATCC 
AGCATTGATC AAAAAGCAGC AGAAATATCT AAAAAATTAT TTTCTACTGA TGGCCTAGCA 
ATACCAATTG CCGACAAGCC CACTGTTTCA AAGCTAGCAA GGGGCTTAGA TCGCACAATG 
GTGCTTGGTG GTGGCGGAGA ATATTACATC GCTTGGTATT GTGGATTTTT TCATGGGCTA 
TATGAGGCTG GATTGGATAT GGCTCAAATA CCAGAAATGG TTGTAGGTAC CTCTGCCGGC 
TCCTACGTGG GATCATCGCT ACTATCTGGT GAGTTTTATC GCCTGCGTAA AGAGTTTGAT 
TTTTTTGGAA AGTTCCCGGA AATATTTTCT CAAATAGCGC CGTTGGCGAC TCCCAATATT 
AGCCAGATGA GAGCCGATCA AATTAATATG AGTGCTACTG ATGGCAGTAT TGAGACACGC 
AAAATAATTG GTGCCGCCGC CTTAGCCGCT GACAATAAAT TAAATAGTAA TCACATCGAA 
AAATTAGCGG GACTATTAAC AGGCGATAGC AAAACAAATT GGCCGGCTAG TAGGATGTTT 
ACAACGGGGA TAGATTGCTA TTCAGGCGAG CGTTTGGTTG TAGGCCAGCA GACTGCCCAA 
AAAAATAATA TTGCTTTAGC ACATGGCGCG GCGGCAAGCA GTTCATTGCC AGGAGTTGCT 
GGACCAACAT TATTGGGTCA GCGCTATGTC ATGGATGGAG GTATTTGTTC TAATCCTGCC 
CATGTAGATT TGGTAGCTGG ATCCAAGAGG GCACTAATAA TTACATTGAC AAACGGCTCT 
ACAGGAGCAA TTCTGACAAC AATTCCACAC CCAATTGCCC AAAATATTAA AGACGTTGAG 
AAAACGGGCA CAAAGGTAAA GTGGATTATT GCGGGTACGC CTCCAGGCAT CAATCTTCTT 
GATCCTAAGC AGATTGAAGG CGCGTTACGA ACTGGGTATG AGCGCTCAAA AATTGAGGCC 
TCAGGTATTA AGGCATTTTG GGCGTAG
 
Protein sequence
MTQSSRRNFL KTSAISSVAI AGSSELVIGY AQAQTKTSKS SIDQKAAEIS KKLFSTDGLA 
IPIADKPTVS KLARGLDRTM VLGGGGEYYI AWYCGFFHGL YEAGLDMAQI PEMVVGTSAG 
SYVGSSLLSG EFYRLRKEFD FFGKFPEIFS QIAPLATPNI SQMRADQINM SATDGSIETR 
KIIGAAALAA DNKLNSNHIE KLAGLLTGDS KTNWPASRMF TTGIDCYSGE RLVVGQQTAQ 
KNNIALAHGA AASSSLPGVA GPTLLGQRYV MDGGICSNPA HVDLVAGSKR ALIITLTNGS 
TGAILTTIPH PIAQNIKDVE KTGTKVKWII AGTPPGINLL DPKQIEGALR TGYERSKIEA 
SGIKAFWA