Gene Pnuc_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2052 
Symbol 
ID5053243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2120479 
End bp2121051 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content39% 
IMG OID640472226 
Productcyclase/dehydrase 
Protein accessionYP_001156827 
Protein GI145590230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.43857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGA TGTTCACGCT CGTCTTAACC TTCTTTTTCT TTATCTCTCA AAGCTTTGCA 
CAAGAGAATT CCAACCCTTT TGATGTTCAA GTAGGCGTGA CGCCTATTGA TGGGCGGTTT 
CATGTCCAGG CAAGCTATTC TGTGCCAATG AATATTTGTA GCGCCTATAC TTTTATTACG 
GACTATGAGG GCTCAAAAAA TATCCCAGGA ATAGTTGAGG CAAAAGTTAT TTCAAGGGTG 
GGCAATAAGG TACGCGTGTA TAGAGTGATA GAAGAGCAAA TTCTCTTTTT CCCTATTGAG 
ATGAAATCTA CAGTGGAATA TACAGAGCTG CCTAATAGAT CATTAACTTT TGAGCAGATT 
AGTGGCGATA CCAGATCTTA CAAAGGCACC TGGAAATTAG TCGAGGAAAA AGAAAAGACA 
CTATTTAAAT ACGACGCTCA AATAGAGCCC AACTCAATCA TTCCCTCAGC CATCATTGAA 
TATTTTATAA AAAACAGTAT GCGAGGCCGA TTTGAATCCA TGGCACAAAG AGCCAGTGAA 
TATAAACCTA TTCAAACTGT AGCCTGTAAA TAG
 
Protein sequence
MKWMFTLVLT FFFFISQSFA QENSNPFDVQ VGVTPIDGRF HVQASYSVPM NICSAYTFIT 
DYEGSKNIPG IVEAKVISRV GNKVRVYRVI EEQILFFPIE MKSTVEYTEL PNRSLTFEQI 
SGDTRSYKGT WKLVEEKEKT LFKYDAQIEP NSIIPSAIIE YFIKNSMRGR FESMAQRASE 
YKPIQTVACK