Gene Pnuc_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2051 
Symbol 
ID5053101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2119323 
End bp2120084 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content41% 
IMG OID640472225 
Producthypothetical protein 
Protein accessionYP_001156826 
Protein GI145590229 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.6044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTC AGTTCATTCA ACTTTTAACC AGCACACATA GGTCTCATAA GACCAATATT 
CAATTGGGCG CCTATATGGC ATTCGTTGCT GGTGCGGTAA ATGCGGGTGG ATTTCTGGCG 
ATTGCTCGTT ACACCTCTCA CATGAGTGGC ATCATTTCTG CGATAGGTGA TGATCTAGCT 
CTCAATGACT TGATTTCTGT TTTGGGCGGC ATATCACTTT TGCTTTCATT TCTATTTGGG 
GCGGCAACTA CTGCCATCAT CGTTAACTGG GGGCATCGAA GAAAAATTCA TAGTGAATTT 
GCTTTACCCT TATTGGTCGA AGCCATCTTG CTCTTGGTGT TCGGTTTGGT TGGGGCCAAC 
TTGAATCTGT ATTTGCCTTT AACTGTTCCA GCAATTGCCC TTCTTCTATG TTTTGTTATG 
GGCTTACAAA ACGCTATTGT GACCAAGGCT TCTAGAGCTG AAATTAGAAC TACGCATATG 
ACAGGCGTAA TTACCGATAT TGGTATCGAG CTGGGTAAAT TGATTTATTG GAATAAATCA 
CAAGAGGCCA ATCAGGTTAG GTATGTCAAA GCCAACAGGG AGAAACTAAC ATCCCATCTA 
TTTATTTTTG GCATGTTTTT GATTGGTGGA ATTATTGGGG CTGTTAGCTT TAAGAAAGTT 
GGCTATATTT CAGTAGTGCC CCTGTCCTTT TCTCTTATAT TAATAGCGGG CCTACAGATT 
TATCGAGATA TTAGAGTTAT CTTGAAAGAT CGGATATCTT AG
 
Protein sequence
MPIQFIQLLT STHRSHKTNI QLGAYMAFVA GAVNAGGFLA IARYTSHMSG IISAIGDDLA 
LNDLISVLGG ISLLLSFLFG AATTAIIVNW GHRRKIHSEF ALPLLVEAIL LLVFGLVGAN 
LNLYLPLTVP AIALLLCFVM GLQNAIVTKA SRAEIRTTHM TGVITDIGIE LGKLIYWNKS 
QEANQVRYVK ANREKLTSHL FIFGMFLIGG IIGAVSFKKV GYISVVPLSF SLILIAGLQI 
YRDIRVILKD RIS