| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2046 |
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| Symbol | |
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| ID | 5053965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2116327 |
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| End bp | 2117010 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640472220 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001156821 |
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| Protein GI | 145590224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAC TCGTAGCCTT TGATGCCTAT GGAACATTGT TTGACGTGTA TTCCATGGGT
CAGTTGGCAG ATGAATTATT TCCGGGGCAT GGCCAAGCTC TTGCTCTGAT GTGGCGCGAT
CGCCAAATTG AATACACCCG CTTGGTAACT ATGAGTGATC CTAATCCCAA TGGTAGTAAG
CACTACCTAC CATTTTGGGA GCTAACCATT CGATCACTTC GATATGTGTG TAAACGAATG
GACATAAATC TAACCCCCGA TTACGAGAAG CGACTGATGG ATCAGTATGC CAAGCTTACT
GGTTTTGATG ATAGCCTAAA TGTGCTCAAG ACAATTAAAC AAAAAGGTAT CTCTACCGCG
ATTCTTTCTA ATGGCAGTAG AGAGATGTTG GCCACGGTAG TGGAAAGTAA TGGCTTGAAG
CCATACTTAG ATAAGGTGGT CACTATTGAA GATGTGCGCC TATTTAAAAC TGCGCCCCAA
GCATATGAGC TTTTATTAAA AGCATTTCCG GTCAAGAAAG AGGAGATTCT GTTTGTATCC
AGTAACGCAT GGGATGCTCT AGCGGCCAAA TGGTATGGCT TTGATGTGTT CTGGGTAAAT
CGACTTGGGC ATCCATTTGA AGAAATTGGT GATAGCCCAA GCTATGAAGG CAATTCTTTA
AGTAGAGTCT TAGAAGTTAT CTAA
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| Protein sequence | MYKLVAFDAY GTLFDVYSMG QLADELFPGH GQALALMWRD RQIEYTRLVT MSDPNPNGSK
HYLPFWELTI RSLRYVCKRM DINLTPDYEK RLMDQYAKLT GFDDSLNVLK TIKQKGISTA
ILSNGSREML ATVVESNGLK PYLDKVVTIE DVRLFKTAPQ AYELLLKAFP VKKEEILFVS
SNAWDALAAK WYGFDVFWVN RLGHPFEEIG DSPSYEGNSL SRVLEVI
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