| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2041 |
|---|
| Symbol | |
|---|
| ID | 5054021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 2110939 |
|---|
| End bp | 2111901 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640472215 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001156816 |
|---|
| Protein GI | 145590219 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGAT TTTTAAAAAT AGCCTTTGCA TTAATCGCCT TCATTAATTT TAATTGCGCA
ATCGCAGACA ATGTCTGGCC TACTCACCCC ATTAAATTTA TTGTTGGGTT TGGTCCTGGC
GGCGCAAATG ATTTAGTAGC GAGAACAGTA GCGGAGGCTG CTTCAAAGCA GTTGGGACAA
CCCATCATTG TTGAGAACAA GCCTGGCGCT GGTTCTGTCT TGGGCGCAGA CTTTGTAGCG
AAAAGTCCAC CTGACGGCTA TACATTCTTT GTAAGCGCCG GAGGGATTGT GACCAATCCC
ATGATTAAGG CAAGCATGCC ATACAAGGAA GGCGACTTAG TTCCGGTTAG CTTGTTGACT
ATTAGCCCAT CGATTGTTGT GGTTTCTGCA GACTCCAAAA TGAATAATCT CAAAGATCTT
TTGGCGCTTG CACATGAGCC GAATGGTCTG AATTTTTCCA CTGCAGGAAC AGGCAGCACT
CCACATTTCG TTGCCGAAAT GCTCAAGGTA AAAGCTGGCG GAAAATATGA AATCATTCCC
TATAAAAGTG GTTCAGAGGG AATGGTAGCA GTCATCTCCA ATCAGGTTGA TGCTACATCG
GAGGCGAGTG TCGTAGTGAT TCCACAAATC CAGGGTGGCA AATTAAAGGC GATTGCTTCG
ACTTGGAATA AGAGAATTGC TGCCTTACCC AATGTACCCA CTACTAAGGA GCAAGGTTAT
CCTGAAGTGC TTATTGGTCA CTGGGCTGGA GTCTTTGCTC CCAAGGGTAC GCCGGATGCG
ATCCTGGATA AAATGAACAA CGCCATCAAT GCAGCCTTGA ATAGTCCCAG CGTTCAAGCT
CGGCTTACTC CGCAAGGCAT TGAGCCTGCG CCAGGTAGCA GAGCATCTTT TTCTAAATTT
TTAGCAGATG AAAAAGGACG CTTAAGCCCT ATAGTTAAAA GAGCCAATAT GAAAGAGGAC
TAA
|
|---|
| Protein sequence | MSRFLKIAFA LIAFINFNCA IADNVWPTHP IKFIVGFGPG GANDLVARTV AEAASKQLGQ
PIIVENKPGA GSVLGADFVA KSPPDGYTFF VSAGGIVTNP MIKASMPYKE GDLVPVSLLT
ISPSIVVVSA DSKMNNLKDL LALAHEPNGL NFSTAGTGST PHFVAEMLKV KAGGKYEIIP
YKSGSEGMVA VISNQVDATS EASVVVIPQI QGGKLKAIAS TWNKRIAALP NVPTTKEQGY
PEVLIGHWAG VFAPKGTPDA ILDKMNNAIN AALNSPSVQA RLTPQGIEPA PGSRASFSKF
LADEKGRLSP IVKRANMKED
|
|---|
| |