| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2025 |
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| Symbol | |
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| ID | 5053342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2097093 |
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| End bp | 2098244 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640472199 |
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| Product | rod shape-determining protein RodA |
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| Protein accession | YP_001156800 |
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| Protein GI | 145590203 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0161321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAGA GCCCCGTAAA AAAAATTCAA TCTATTTTCT TCAGCCTCTT CTCAGGACTT
GATCGGCAGC TAGGCCTTAT TCTTCTTGGC TTGGCGGCAG TTGGATTTTT TACATTCTTA
TCTGCAAGTC AAAATACTCC CGTTCAAATT ACCGATGAAC TTCGCAACCT TGCTTTGTCA
TTTGTAGTGA TGTGGCTTGT TTCGCGGATT CCACCCAAGT GGTTGGAGAT GGGTGCCGTT
TGGATTTATA GTCTTGGTGT AGCCTTATTA GTGGCAGTGG CGGTGTTTGG CTTAATTAAA
AAAGGCGCAC GTCGCTGGCT CAATATTGGG GTTGTTATTC AGCCCTCTGA AATCATGAAG
ATCGCAATGC CACTGATGTT GGCGTGGTAC TTTCAAAAGC GTGAGGGCTT AAAAAAATCT
TGGGACTATG CAGTAGCCGT GATTATTTTG ATAATTCCCG TTTTCTTAAT TGCTAGACAG
CCAGATCTTG GGACTGCGTT ACTTGTATTT GCAGCCGGCC TATATGTCAT CATCTTGGCA
GGACTGCCTT GGAAGTGGAT TTTGCCTTTT GTAGCTATCG GCGTAATTGG AATTCTTCTC
ATCATCATTT TTGGTGGAAC CATTTGTGCA CATGATGTAG TTTGGCCATT TGTACATGAT
TATCAAAAGC ACCGCATCTG TACCTTGCTT GATCCAAGTA GTGATCCACT AGGAAAAGGA
TTTCATACAA TTCAATCCAT GATCGCAATT GGCTCGGGTG GATTTTTTGG AAAAGGCTGG
TTCCAGGGAA CGCAAGCGCA CTTAGAATTT ATTCCTGAGA AACACACTGA CTTTGTGTTT
GCCGTTTTCT CAGAAGAGTT TGGCCTTCTC GGAAATCTCA TATTGCTTGC GCTGTTCTAT
GCTCTTATCA AAAGAGGTTT AGCGATTTCA GCAAGCGCAC CCAATTTATT TACACGCCTC
TTAGGCGCTT CAGTGACATT AATTTTCTTT ACTTATGCAT TTGTAAATAT CGGCATGGTG
AGTGGCCTAC TACCGGTGGT AGGGGTCCCA TTACCCTTCA TTAGCTATGG AGGAACTGCT
TTAGTGACAT TAGGTTTTGG GGCTGGCATT CTGATGAGCA TTCATCGCCA TCGCCGTTTA
GTGCAAAGCT AA
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| Protein sequence | MEKSPVKKIQ SIFFSLFSGL DRQLGLILLG LAAVGFFTFL SASQNTPVQI TDELRNLALS
FVVMWLVSRI PPKWLEMGAV WIYSLGVALL VAVAVFGLIK KGARRWLNIG VVIQPSEIMK
IAMPLMLAWY FQKREGLKKS WDYAVAVIIL IIPVFLIARQ PDLGTALLVF AAGLYVIILA
GLPWKWILPF VAIGVIGILL IIIFGGTICA HDVVWPFVHD YQKHRICTLL DPSSDPLGKG
FHTIQSMIAI GSGGFFGKGW FQGTQAHLEF IPEKHTDFVF AVFSEEFGLL GNLILLALFY
ALIKRGLAIS ASAPNLFTRL LGASVTLIFF TYAFVNIGMV SGLLPVVGVP LPFISYGGTA
LVTLGFGAGI LMSIHRHRRL VQS
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