| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1928 |
|---|
| Symbol | |
|---|
| ID | 5053048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 2005842 |
|---|
| End bp | 2006732 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640472103 |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_001156704 |
|---|
| Protein GI | 145590107 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0552] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.838308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCC TACGTAAAAC CCTCGGATCC CTATTCAAAA CCAGCAAGAC GGATGAAGCT
TGGTTTGATA CTTTAGAAGA GTCACTCATT CAAAGTGATG TGGGCCTCCC CACAACTGAA
CAATTGATTA TCAAATTACG TAAAGCTGCA AAATCTGAAA AAGCATCCAG CCCAGAAGAG
CTCCAGGCAC TCCTCATACA AGAAGTGAGT ACCTTACTAG GTTCACTAGA ACCAAATCCA
AACCCATTAT TTACAGATCA GAAGATCCAT ATTCCCGAGG TTTGGTTGGT AGTAGGGGTG
AATGGTGCAG GCAAAACCAC CACTATTGGC AAGTTATGCA AGCTCTTTCA ATCTCAAGGT
AAATCGGTAT TACTGGCAGC TGGCGACACT TTTAGGGCGG CCGCTAGAAA TCAACTTCAA
GAATGGGGTG GCAGAAATCA AGTGGATGTC ATCACTCAAG ATGGTGGTGA CGCAGCTGCC
GTAGCCCATG ATGCAATTCA TGCGGCCAAC TCTCGCAAGA GTGACATCTT AATTATTGAT
ACAGCGGGAC GACTGGCTAC CCAAGATCAC CTCATGGAAG AGCTCAAAAA AGTGAAGCGG
GTGATTGGCA AGGCGCTTCC TGGCGCCCCT CACCACACCC TACTGGTACT AGATGGCAAC
ACAGGACAGA ATGGTTTAAG CCAGGTAAAG GCCTTTCATG CAGCCCTGGG ACTTACAGGG
CTCATTGTTA CTAAGTTAGA TGGCACCGCC AAAGGGGGTG TCATTTGCGC CCTTGCTCAC
ACTCTGAAAG ATGAACCCAA ACCGGCTGTT TTAGCCCTAG GCAAAGGTGA AGGAATTGAT
GATTTAGTGC CTTTCACAGC CCACCAGTAT TCATCTGAAT TATTCAATTA A
|
|---|
| Protein sequence | MFGLRKTLGS LFKTSKTDEA WFDTLEESLI QSDVGLPTTE QLIIKLRKAA KSEKASSPEE
LQALLIQEVS TLLGSLEPNP NPLFTDQKIH IPEVWLVVGV NGAGKTTTIG KLCKLFQSQG
KSVLLAAGDT FRAAARNQLQ EWGGRNQVDV ITQDGGDAAA VAHDAIHAAN SRKSDILIID
TAGRLATQDH LMEELKKVKR VIGKALPGAP HHTLLVLDGN TGQNGLSQVK AFHAALGLTG
LIVTKLDGTA KGGVICALAH TLKDEPKPAV LALGKGEGID DLVPFTAHQY SSELFN
|
|---|
| |